DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and CG8281

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster


Alignment Length:344 Identity:66/344 - (19%)
Similarity:111/344 - (32%) Gaps:133/344 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 TRRPRRAARASISFAGI-----RDLPIQKPGQAQRMTRLQRRKSMSL-------AAVHS------ 368
            |.|.:| |.|.:....|     ||..::...:.....|...||.:.:       .::||      
  Fly    45 TNREKR-AEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKVVESALRSGSLHSPRCWTF 108

  Fly   369 -----VRSSTSPVKMTPVPRSQP------INKPPSGPVQ-------------------ITKISHR 403
                 :|:|...:.:.|..:::|      .:..||..::                   |:::.|:
  Fly   109 QELDFLRNSEKFLAVNPAFKNEPNFAFGESSNCPSAFLESQGAALHYPAPRAGGQTPNISEMFHK 173

  Fly   404 DDIFPRPAVPSGVVN-INQNQLKTQQQQKTLIFPTTDEAIANPQGSGP----------------- 450
            .  |..|..|....| ::....|..:|..    |.|.....:..|.|.                 
  Fly   174 S--FGAPPPPPPATNHVDYGSSKRARQTP----PCTGAGAGSTGGPGATGTAHNTDELLNIACEY 232

  Fly   451 -----PQRRSVGR----PPKKLPMVQRIVAPETQTKPQSPINTKVLTIGKPTSSVASGNINNIAI 506
                 |:..|:.|    ..|:||..||::|...                          ||.|..
  Fly   233 LAGTYPEEESIARTWTHKLKRLPREQRLLAERF--------------------------INEILF 271

  Fly   507 KSNVVTSISSSTATTNTITKGT--SNNS----IKTTENVN-----VISYSPNSSSTSSSSKATTG 560
            :           |.:|.:.:|:  .|||    ::..|..|     ..|.||:..::|.|....:|
  Fly   272 E-----------AESNNLHRGSVQINNSFEPYVRYEETPNGHEEQDKSQSPSVHTSSESKPNVSG 325

  Fly   561 ASGAVITNIP---TTTTAG 576
            |||:.....|   |||:||
  Fly   326 ASGSGGGGGPPGSTTTSAG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738
COG5177 <131..>267 CDD:227504
BESS 604..637 CDD:460758
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 13/69 (19%)
Blue background indicates that the domain is not in the aligned region.

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