DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and CG10904

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster


Alignment Length:220 Identity:44/220 - (20%)
Similarity:82/220 - (37%) Gaps:55/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 PEKSLEKNNTDSTVSQPEFFVKQT-----RDPRLLIIGRK-----NSTSSFAESKASKSISGDPL 294
            |.||.|...|..|..|..   |||     :..:|:.:.|.     |..|...::|..::.:.:.:
  Fly     2 PNKSEELGETQLTKRQRR---KQTIWTREKIAKLIELYRSSDCLWNHYSELYKNKDCRAKAIESI 63

  Fly   295 ETAMEDSGDEYGRDG--------------EKRV--TGSDTTSPTRRPRRAAR----ASISFAGIR 339
            ..::|.:..:||:..              |:|:  :|.|     |...:|.|    .::.|  :|
  Fly    64 CASLEITKHDYGKKVHNLRNQFNAELKKLERRLEESGGD-----RDSEKACRWEHFKTLMF--LR 121

  Fly   340 DLPIQKPGQAQ------RMTRL---------QRRKSMSLAAVHSVRSSTSPVKMTPVPRSQPINK 389
            .:...:||..|      .:::|         :::...|:.::.|:..........|...|:||..
  Fly   122 SVIEPRPGYQQGAPGKKLVSKLDMCYPDQDVEKQSQSSIESLESMIIENDAEICQPPKVSEPIPP 186

  Fly   390 PPSGPVQITKISHRDDIFPRPAVPS 414
            .|..|...:|....:.....||.||
  Fly   187 MPPEPAPSSKFVDPNRTVEAPAAPS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738
COG5177 <131..>267 CDD:227504 10/31 (32%)
BESS 604..637 CDD:460758
CG10904NP_611860.1 MADF 31..125 CDD:214738 17/100 (17%)
Blue background indicates that the domain is not in the aligned region.

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