DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and madf-4

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:226 Identity:48/226 - (21%)
Similarity:90/226 - (39%) Gaps:29/226 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EVNLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEV---GESVEKCKRRWRQLRNDYTRW 67
            :..|.|:.||::...:|:|.|..::........|.:::.|:   |:.|| .:|:|:.:|:.|.|.
 Worm    17 DFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVE-LERKWKHMRDKYVRL 80

  Fly    68 CNADANRRRNGQRRLAYPLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGVDHHAQ- 131
            ...|..:....:....|....::.|||.::         :.|:....||..|:...:.:|.... 
 Worm    81 RKQDKQKAPIKKTNKWYNYYHKMSFLDPYV---------EHRNRKRQKDYLNSNTPDFLDDDTAF 136

  Fly   132 ---ASLKERASSTSKLVKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLNDLEESDE 193
               .|:||.....|.|.......:......||.....|  |.|       :..:....|:|: |:
 Worm   137 LDGLSVKEMLKPESLLTSNDAGYNSPHTTSSSSSSGSN--NNG-------RFLDSPTIDIED-DK 191

  Fly   194 PEKVPELDSFL--QSDNEDDECMDEEHLEDL 222
            .......|.|:  |::||.:.....:|.:||
 Worm   192 KNLALIYDKFVANQTENEKNHRFSNKHGKDL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738 21/89 (24%)
COG5177 <131..>267 CDD:227504 21/98 (21%)
BESS 604..637 CDD:460758
madf-4NP_505565.3 MADF 22..111 CDD:214738 21/98 (21%)
Blue background indicates that the domain is not in the aligned region.

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