DRSC/TRiP Functional Genomics Resources

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Protein Alignment stwl and madf-5

DIOPT Version :10

Sequence 1:NP_524068.2 Gene:stwl / 39581 FlyBaseID:FBgn0003459 Length:1037 Species:Drosophila melanogaster
Sequence 2:NP_497028.1 Gene:madf-5 / 175118 WormBaseID:WBGene00007242 Length:423 Species:Caenorhabditis elegans


Alignment Length:279 Identity:54/279 - (19%)
Similarity:94/279 - (33%) Gaps:78/279 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NLMLLRSVEKQTALYDRTDENYRKRLPSENAWDMVASEVGE--SVEKCKRRWRQLRNDY------ 64
            |..|:..|.|...||:.:.......:..:..|:.:|..:..  :.|..|:||.|||:.|      
 Worm     8 NARLINEVRKYPCLYNHSRRGSGDTMERQRLWESIAKNIDPNCAAEFAKKRWLQLRDRYRKELKI 72

  Fly    65 ---------TRWCNADANRRRNGQRRLAYPLADELRFLDRHLNIADDMAADDDR----------- 109
                     .|||                 ..::|.:||..|......|||:.:           
 Worm    73 AIKNGFVTPVRWC-----------------YFNQLSWLDPFLKDNIGQAADEGKKTGKSDSFDEP 120

  Fly   110 -----------SVSSDKDRDNNRDSE-----GVDHHAQASLKERASSTSKLVKEVKLASQVRKEK 158
                       :::|.||...:.||:     .|.....|...:|..|.|..::..:..:|     
 Worm   121 SGTPFSWFGFPNLNSIKDEMEDDDSDPALESSVLDRLLAQTAQRLDSISPEIENDESGTQ----- 180

  Fly   159 SSQDKRENWENPGDKQRSRKKSAEEKLNDLEESDEPEKVPELDSFLQSDNEDDECMDEEHLEDLE 223
            |.....:..:..||::...|...|:::    |.|.||||......:....|......::..:.  
 Worm   181 SLDGNLDGVDGDGDEEEDLKIKDEDEV----EEDGPEKVKSQSEAMAMLKEAISAQSQQQTQQ-- 239

  Fly   224 GFDFDLEQSNQEKELTPEK 242
                  .|..|:.:.||:|
 Worm   240 ------AQQVQQVQQTPQK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwlNP_524068.2 MADF 11..98 CDD:214738 21/103 (20%)
COG5177 <131..>267 CDD:227504 22/112 (20%)
BESS 604..637 CDD:460758
madf-5NP_497028.1 MADF 10..98 CDD:214738 21/104 (20%)
Blue background indicates that the domain is not in the aligned region.

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