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Protein Alignment stwl and LOC110438041
DIOPT Version :9
Sequence 1: | NP_001261839.1 |
Gene: | stwl / 39581 |
FlyBaseID: | FBgn0003459 |
Length: | 1037 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021323091.1 |
Gene: | LOC110438041 / 110438041 |
-ID: | - |
Length: | 277 |
Species: | Danio rerio |
Alignment Length: | 167 |
Identity: | 40/167 - (23%) |
Similarity: | 67/167 - (40%) |
Gaps: | 47/167 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 478 PQSPI-NTKVLTIGKPTSSVASGNINNIAIKSNVVTSISSSTATTNTITKGTSNNSIKTTENVNV 541
|.||: :|.|| || :|.:|.:.||:.......:|...:..:.:..:|..
Zfish 145 PSSPVPSTPVL----PT-------------QSTLVPATSSTPPPPCPSSKCYPSPCLVSAFSVPN 192
Fly 542 ISYSPNSSSTSSSSKATTGASGAVITNIPTTTTAGTSVPVGKSITQ---LKMTERGTQTGVQNPF 603
||.|||:|.:||. .:|..||.:: |.|.|:...|..:.|.
Zfish 193 ISPSPNASPSSSE-----------------------LMPKRKSTSEACLLNMLEQMEWTREKTPH 234
Fly 604 SDN---YFLEMIKPQMQEMNPRQKMHFKKKVFQALME 637
.|: .|..::...:.:::||.|...|.|::|.|.|
Zfish 235 QDSEDFRFASVVVDMLAKIDPRMKSEVKFKIYQMLYE 271
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
stwl | NP_001261839.1 |
MADF |
11..98 |
CDD:214738 |
|
BESS |
604..637 |
CDD:281011 |
9/35 (26%) |
LOC110438041 | XP_021323091.1 |
MADF_DNA_bdg |
10..77 |
CDD:313715 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1634040at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm6558 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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