DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LGALS3 and Pex23

DIOPT Version :10

Sequence 1:NP_001344607.1 Gene:LGALS3 / 3958 HGNCID:6563 Length:264 Species:Homo sapiens
Sequence 2:NP_730508.1 Gene:Pex23 / 40229 FlyBaseID:FBgn0288469 Length:1350 Species:Drosophila melanogaster


Alignment Length:144 Identity:41/144 - (28%)
Similarity:64/144 - (44%) Gaps:17/144 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   131 PYNLPLPGGVVPRMLITILGTVKPNANRIALDFQ-------------RGNDVAFHFNPRFNENNR 182
            ||...|..|:.....:.|.|.|..:|::|..|.|             :...:|.|.||||||   
  Fly   815 PYYNTLYNGMPCGTELEISGCVYDDADQIRFDLQSHSAVKVQPHRVEKHRVIALHLNPRFNE--- 876

Human   183 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISK 247
            |..|.|:..::.|..|.|.....|..|..|.:::....||:.:.||:|....|.:|:.. ..:::
  Fly   877 RTTVLNSMKESEWLDEIRNDKMAFAPGATFSLKIRALQDHYLIIVNNAVYTDYKYRIDP-ESVTR 940

Human   248 LGISGDIDLTSASY 261
            |.:||.|.|.:..|
  Fly   941 LYVSGRIKLFNVLY 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LGALS3NP_001344607.1 PRK07764 <23..127 CDD:236090
GLECT 131..258 CDD:238025 40/139 (29%)
Pex23NP_730508.1 DysFN 64..125 CDD:214777
Tectonin 210..398 CDD:465992
PH-like 639..759 CDD:473070
Gal-bind_lectin 821..953 CDD:459768 37/135 (27%)
TECPR 966..1000 CDD:214782
DysFN 1021..1081 CDD:214777
DysFC 1092..>1113 CDD:128935
Tectonin <1165..1333 CDD:465992
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.