DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13481 and AT5G43200

DIOPT Version :9

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_199134.1 Gene:AT5G43200 / 834338 AraportID:AT5G43200 Length:207 Species:Arabidopsis thaliana


Alignment Length:141 Identity:36/141 - (25%)
Similarity:60/141 - (42%) Gaps:22/141 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VTEHLFLRAQQLLDSDVSIEERVRRMEVLNNNMKWFNSERTRILEQLQLNIFGQISVEHHNAMNM 88
            |.:||   ..||.|.|:|.:...:.:|.....    .|:...:.:|..|.|...:.:.|      
plant    77 VYQHL---QTQLHDHDLSEQISCKIVEAQQRQ----TSQSVYLPQQPPLFIIVSVKLTH------ 128

  Fly    89 SENLY----ELREGLDGLSRRMESMQEDITCSICLSPWSSNGRHRVVSLRCGHLFGNSCI-RTAI 148
              .:|    .|...||....:.|. :|..||:|||...|::..:..:. .|.|.|...|: :..|
plant   129 --KVYVVVPPLATDLDQEMSQGEE-EESKTCAICLEELSTSDDYCELP-NCTHCFHEPCLTQWLI 189

  Fly   149 RRSHRCPICRR 159
            |.::.||:||:
plant   190 RGNNSCPLCRK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 zf-RING_2 114..158 CDD:290367 14/44 (32%)
AT5G43200NP_199134.1 RING 155..202 CDD:238093 16/47 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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