DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13481 and AT5G37280

DIOPT Version :10

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_198544.1 Gene:AT5G37280 / 833702 AraportID:AT5G37280 Length:216 Species:Arabidopsis thaliana


Alignment Length:154 Identity:38/154 - (24%)
Similarity:63/154 - (40%) Gaps:31/154 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LRAQQLLDSDV--SIEERVRRMEVLNNNMKWFN-----SERTRILEQLQLNIFGQISVEHHNAMN 87
            ||.|...|:.:  |:.|::..:.....|...:.     :.:.|::::::. |...:|.....|  
plant    74 LRRQLHRDTSICESLAEKISSLRFSRANYTLYQRPFLMTVKVRVIKEVRF-IVSPVSAPSSGA-- 135

  Fly    88 MSENLYELREGLDGLSRRME------SMQEDITCSIC---LSPWSSNGRHR-VVSL-RCGHLFGN 141
                      .:|...|.:|      ||..|.:||||   ||...|...|. ::.: :|.|.|..
plant   136 ----------PVDVFQRLLEEQTVEPSMDSDESCSICFEKLSDSLSETYHNSIIQMPKCLHSFHQ 190

  Fly   142 SCIRTAIRRSHRCPICRRRALHAD 165
            .||...|.|.:.||:|||.....|
plant   191 KCIFKWIGRQNSCPLCRRVPFEED 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 mRING-C3HGC3_RFWD3 111..170 CDD:438114 22/60 (37%)
AT5G37280NP_198544.1 COG5540 <107..207 CDD:227827 27/112 (24%)
zf-RING_2 158..207 CDD:433370 17/48 (35%)

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