DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13481 and AT5G37220

DIOPT Version :9

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_198538.1 Gene:AT5G37220 / 833696 AraportID:AT5G37220 Length:214 Species:Arabidopsis thaliana


Alignment Length:45 Identity:17/45 - (37%)
Similarity:27/45 - (60%) Gaps:6/45 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 RRMESM---QEDITCSICLSPWSS-NGRHRVVSLRCGHLFGNSCI 144
            :::||:   :|..|||||:...:| :....::|  |.|||..|||
plant   146 QKVESIDLEEEKKTCSICMENLNSESSSENIIS--CLHLFHQSCI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 zf-RING_2 114..158 CDD:290367 14/32 (44%)
AT5G37220NP_198538.1 RING-H2 160..>188 CDD:319362 11/29 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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