DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13481 and AT5G37200

DIOPT Version :9

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_198536.1 Gene:AT5G37200 / 833694 AraportID:AT5G37200 Length:217 Species:Arabidopsis thaliana


Alignment Length:177 Identity:42/177 - (23%)
Similarity:64/177 - (36%) Gaps:54/177 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LLDSDVSIEERVRRMEVLNNNMKWFNSE--------------RTRILEQLQLNIF-GQISVEHHN 84
            |:..:..|||.:.....:..|:.|:.|.              ..|:|.||..:.| ||...  |:
plant    29 LIYQEEEIEELIEYESGIVANLGWYTSPLETNAHILLNPRRLTRRVLTQLLDDQFLGQKIA--HD 91

  Fly    85 AMNMSENLYELRE--------------------GLDGLSR--------------RMESM---QED 112
            ..:...|...||:                    |...|||              |:||.   :||
plant    92 VKDSFANDNSLRQPVTVTVYVTYIKERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEED 156

  Fly   113 ITCSICLSPWSSNGRHRVVSLRCGHLFGNSCIRTAIRRSHRCPICRR 159
            .|||||:..:|.:....:....|.|||...|:...:...:.||:||:
plant   157 ETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 zf-RING_2 114..158 CDD:290367 13/43 (30%)
AT5G37200NP_198536.1 zf-rbx1 <155..202 CDD:289448 15/46 (33%)
zf-RING_2 157..202 CDD:290367 13/44 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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