DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13481 and AT3G42940

DIOPT Version :9

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_189880.1 Gene:AT3G42940 / 823349 AraportID:AT3G42940 Length:193 Species:Arabidopsis thaliana


Alignment Length:141 Identity:26/141 - (18%)
Similarity:48/141 - (34%) Gaps:52/141 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QVTEHLFLRAQQLLDSDVSIEERVRRMEVLNNNMKWFNSERTRILEQLQLNIFGQISVEHHNAMN 87
            |:::.:.::||| |.||.|.:                           .|.:|..:||      .
plant    92 QISDRIVVKAQQ-LRSDRSSD---------------------------HLPLFMGVSV------I 122

  Fly    88 MSENLYEL-----REGLDGLSRRMESMQEDITCSICLSPWSSNG--------RHRVVSLRCGHLF 139
            .:..:|::     ......|..:..:.:|...|:|||.....:|        .|     .|.|:|
plant   123 FTRKVYKVLPCNCAPSTPDLVEKEAAEEETEACAICLEDMLESGFDDKQIYRMH-----NCWHMF 182

  Fly   140 GNSCIRTAIRR 150
            ...|:..::.|
plant   183 YEGCVMESLNR 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 zf-RING_2 114..158 CDD:290367 11/45 (24%)
AT3G42940NP_189880.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2695
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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