DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13481 and dbl5

DIOPT Version :10

Sequence 1:NP_001097605.1 Gene:CG13481 / 39579 FlyBaseID:FBgn0036421 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_587745.1 Gene:dbl5 / 2539314 PomBaseID:SPCC548.05C Length:468 Species:Schizosaccharomyces pombe


Alignment Length:138 Identity:30/138 - (21%)
Similarity:61/138 - (44%) Gaps:31/138 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QQLLDSDVSIEERV------RRMEVL----NNNMKWFNSERTRILEQLQLNIFGQISVEHHNAMN 87
            |.:||.|  .||..      .:||||    :|:..:.:|:.|::.::.:::             :
pombe     9 QVVLDED--DEENYNNNLDDEKMEVLLIPQSNSTTFASSDATQMYKKSRIS-------------S 58

  Fly    88 MSENLYELREGLDGLSRRMESMQEDITCSICLSPWSSNGRHRVVSLRCGHLFGNSCIRTAIRRSH 152
            .|||..::.: ...|....:.:::.:.|.||     :....|..:..|||.:...|:...::.|.
pombe    59 NSENKKQIPD-TKTLLETFQKIKKTLECPIC-----TEALQRPFTTHCGHTYCYECLLNWLKESK 117

  Fly   153 RCPICRRR 160
            .||.||::
pombe   118 SCPTCRQK 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13481NP_001097605.1 mRING-C3HGC3_RFWD3 111..170 CDD:438114 13/50 (26%)
dbl5NP_587745.1 PHA02929 <16..125 CDD:222944 26/127 (20%)
RING-HC_ScPSH1-like 79..130 CDD:438230 13/52 (25%)

Return to query results.
Submit another query.