DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and YVC1

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_014730.2 Gene:YVC1 / 854255 SGDID:S000005613 Length:675 Species:Saccharomyces cerevisiae


Alignment Length:468 Identity:81/468 - (17%)
Similarity:182/468 - (38%) Gaps:119/468 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 LYFLISLFSFILRPGPDAKDEDEDGANSTTAKSDLY----------------------RQNGSDS 459
            |:..:.|..:::    :..|||::..|:....:|::                      .|||.|.
Yeast   147 LFMQLLLRRYVI----NENDEDQEPLNALELATDMHCTTVIGSSGFQRCLKWIWRGWIVQNGLDP 207

  Fly   460 YHLHSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMNL------------ESDLA 512
                   .|...:.....::...:::|  |.:....:::|.|.....|            :|:..
Yeast   208 -------TTFIKDDSLAEVSLISHFNP--VRLKAPVYQNYLQMIFSFLFLGLYTLVVNGKDSERV 263

  Fly   513 KLRIMAELLNFVGAILYLLVALREARFLG-LKMFIENLMTAPSRVMFLFSCAL-MMTIPWLRVSC 575
            :...:.|.:.:|....::|..|.:..::| ..:...||....:.::..|:... .|::..|....
Yeast   264 QSFDLLESIFYVFNTGFILDELTKLYYIGYAHLSFWNLFNDTTYLIITFAMGFRAMSVTPLNAKY 328

  Fly   576 LTEIDDHVTVVIMLTTAPY----FLFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQ 636
            .:|..|.::..::...||:    .|.:....:.:|..:|::..|:...::.|..::|:.: ||:|
Yeast   329 SSEDWDKISYRVLSCAAPFVWSRLLLYLESQRFIGIMLVILKHMMKESIVFFFLLFLIMI-GFTQ 392

  Fly   637 AFYIIFLTFDNPSSPEDQDAESNPMPSPMESIVAMFLMSLTNFGDYYGAMVSTQHEYE---AKIL 698
            .    ||..|:.....|       :..|:...:.:.::.|.:|..:        .|:.   |.||
Yeast   393 G----FLGLDSADGKRD-------ITGPILGNLTITVLGLGSFDVF--------EEFAPPYAAIL 438

  Fly   699 FFLFMVIVSVLLVNMLIAMMGNTYQKIAE-IRNEWQRQWARIVLVVERS------VPPAERLKNF 756
            ::.:..||||:|:|:|||:....|||:.: ..:|:....::..|...|:      |.|...::.|
Yeast   439 YYGYYFIVSVILLNILIALYSTAYQKVIDNADDEYMALMSQKTLRYIRAPDEDVYVSPLNLIEVF 503

  Fly   757 MQYSQSMSDGRRALVLRLNMTEEEKE-----------------EMKEVQEMKRIHQRFAKKRQME 804
            |           ..:.|:...:..|:                 .:||.:|.:||  ::.:.:::.
Yeast   504 M-----------TPIFRILPPKRAKDLSYTVMTIVYSPFLLLISVKETREARRI--KYNRMKRLN 555

  Fly   805 REARALRRQQEYE 817
            .:|      .||:
Yeast   556 DDA------NEYD 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560
ANK <131..200 CDD:238125
ANK repeat 138..174 CDD:293786
ANK 178..329 CDD:238125
ANK repeat 179..229 CDD:293786
Ank_2 184..311 CDD:289560
ANK repeat 231..278 CDD:293786
ANK repeat 280..311 CDD:293786
Ion_trans 519..727 CDD:278921 46/216 (21%)
YVC1NP_014730.2 Ion_trans 235..470 CDD:395416 50/254 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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