DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and trpv1

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_005165384.1 Gene:trpv1 / 561195 ZFINID:ZDB-GENE-030912-8 Length:819 Species:Danio rerio


Alignment Length:839 Identity:181/839 - (21%)
Similarity:320/839 - (38%) Gaps:277/839 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IHDY----CPEVSEAEYISNPTAYRFVCWDLNMRGAVGETILHLCLLNASSLHADLAKRLLKFYP 166
            :|:|    ...:::::|.||                 |:|.|...|||......|..::||....
Zfish   100 LHEYLHKNMKRLTDSQYKSN-----------------GKTALLKALLNLRQGENDTIEQLLDIAE 147

  Fly   167 KL-----ILDIYMSDEYY-GESVLHIAIVNEDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRT 225
            |:     .::...:|.|| |::.||:||.......|:.|:...|||..:.||.|.          
Zfish   148 KMGDLKNFINAAYTDSYYKGQTALHVAIERRSMKFVQMLVKKGADVHAKACGKFF---------- 202

  Fly   226 DSPDHEYVALCPMTNYDGYVYWGEYPLSFAACLSQEECFRLVLA---RGADPDFQDTNGNTVLHM 287
             .|:.:   :|        .|:||.|||.|||.:|::....::.   :..|...:|.:||||||.
Zfish   203 -QPNQK---MC--------FYFGELPLSLAACTNQQDIVDFLMENPHQAVDVRERDCHGNTVLHA 255

  Fly   288 LVIYEK---------IEMFDVGYEVGTNIH-------IKNIQNLTPLTLAAKLGRVEMFFHVMSI 336
            ||....         |.|:|........:|       |:|.:.|||:|||||.|::.:|.|:  :
Zfish   256 LVSVADNSPENTEFVIAMYDHILIKADQLHPKTKLEEIENNEGLTPITLAAKKGKLGLFKHI--V 318

  Fly   337 EREIY-----------WQLGSITCAAYPLLMIDTINEETGNINKDSVLNFVVFGDKL-EHLELLD 389
            :||:.           |..|.:..:.|.|..:||       ..|:|.|..||:|.:: ..||:|.
Zfish   319 QRELMGCRHLSRKITEWAYGPVCSSLYDLSSLDT-------YEKNSALEIVVYGSEIPNRLEMLQ 376

  Fly   390 GVVID-LLKTKWDTFCKSRFYKQFYMFALYFLISLFSFILRPGPDAKDEDEDGANSTTAKSDLYR 453
            ...:: |::.|||.|....|...|.::.:|    ||.|                   || |..|.
Zfish   377 IEPLNRLIEEKWDQFAHRMFLFNFIVYVIY----LFIF-------------------TA-SAFYH 417

  Fly   454 QNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMNLESDLAKLRIMA 518
            :.|.|                                     :.:..:.|.:..:|....|.:..
Zfish   418 EEGKD-------------------------------------YANQTKPPYLYAKSREGYLLLTG 445

  Fly   519 ELLNFVGAILYLLVAL-----REARFLGL--------KMFIENLMTAPSRVMFLFS-------CA 563
            .:::..||..:.:..|     :..||..|        ..|::.|:...|.|::.:.       ..
Zfish   446 HIISITGAFYFFIRGLIDMVRKRPRFQSLIIDGYTDQLFFVQGLLFLASVVLYCYGQYEYLAFLV 510

  Fly   564 LMMTIPWLRVSCLTEIDDHVTVVIMLTTAPYFLFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYL 628
            |.:.:.|:.:                      |:|.||.|.:|.:.|||.:||:|::.||:.:|:
Zfish   511 LCLALSWINL----------------------LYFSRGSKNLGIYNVMIQKMVLGEIRRFLVVYM 553

  Fly   629 VFVMGFSQAFYIIF--------------LTFDNPSSPEDQDAESNPM------------------ 661
            ||::|||.|...:.              |:.|.||.....|: |||.                  
Zfish   554 VFLIGFSAALVTLLDQESIDSGSTRDFRLSEDIPSLNPTPDS-SNPQSRMTHHQPTTARDGRGRF 617

  Fly   662 -----------PSPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAK----ILFFLFMVIVSVLLV 711
                       ..|....:....:.|..|....|.:..|.| |:.|    :|..:::|:..:|::
Zfish   618 GLTTDNQYEVCKKPSYKNIYFTTLELFKFTIGMGDLEFTDH-YKYKEVFYVLLIVYIVMTYILML 681

  Fly   712 NMLIAMMGNTYQKIA-EIRNEWQRQWARIVLVVERSVPPAERLK--------------------- 754
            |||||:|..:.:.:: |..:.|:.|.|...|.:|..:|...:.|                     
Zfish   682 NMLIALMNQSVEMMSVESTSIWKLQRAITTLDMEWILPKCLQGKLRSGEEKDLGGGQEPDRRWCF 746

  Fly   755 -----NFMQYSQSMSDGRRALVLRLN---MTEEEKEEMKEVQEMKRIHQRFAKKRQMER 805
                 |:.|::::|     .:::..:   .|::......:.:..:.:.|.|:::|:.:|
Zfish   747 SVEEVNWTQWNRNM-----GIIINEDPGKCTQDPSPANVQREPSRGVLQTFSRRRRTQR 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 23/83 (28%)
ANK <131..200 CDD:238125 19/74 (26%)
ANK repeat 138..174 CDD:293786 10/40 (25%)
ANK 178..329 CDD:238125 52/170 (31%)
ANK repeat 179..229 CDD:293786 14/50 (28%)
Ank_2 184..311 CDD:289560 39/145 (27%)
ANK repeat 231..278 CDD:293786 12/49 (24%)
ANK repeat 280..311 CDD:293786 13/46 (28%)
Ion_trans 519..727 CDD:278921 58/275 (21%)
trpv1XP_005165384.1 ANK 74..187 CDD:238125 24/103 (23%)
Ank_2 85..196 CDD:289560 28/112 (25%)
ANK repeat 119..162 CDD:293786 11/59 (19%)
ANK 165..318 CDD:238125 53/176 (30%)
ANK repeat 167..197 CDD:293786 10/29 (34%)
ANK repeat 212..246 CDD:293786 10/33 (30%)
Ank_2 217..321 CDD:289560 33/105 (31%)
Ion_trans <485..689 CDD:278921 51/227 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578397
Domainoid 1 1.000 81 1.000 Domainoid score I8466
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48943
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6594
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4284
SonicParanoid 1 1.000 - - X396
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.990

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