DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nan and trpv4

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_005165208.1 Gene:trpv4 / 557850 ZFINID:ZDB-GENE-030912-7 Length:859 Species:Danio rerio


Alignment Length:680 Identity:176/680 - (25%)
Similarity:279/680 - (41%) Gaps:191/680 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 AVGETILHLCLLNASSLH----------ADLAKR---LLKFYPKLILDIYMSDEYYGESVLHIAI 188
            :.|:|.|...|||   ||          .|:|::   |.:|......|:|    |.|:..|||||
Zfish   199 STGKTCLPKALLN---LHNGQNDTIPILVDIAEQTGNLREFINTPFRDVY----YRGQMALHIAI 256

  Fly   189 VNEDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVYWGEYPLS 253
            .......|:.|::..|||..:..|.|....|.                     .||.|:||.|||
Zfish   257 ERRCKQYVELLVEKGADVHAQARGRFFQPRDE---------------------GGYFYFGELPLS 300

  Fly   254 FAACLSQEECFRLVLARG---ADPDFQDTNGNTVLHMLV-IYEK--------IEMFDV----GYE 302
            .|||.:|.:....:...|   ||...||:.||||||.|| |.:.        .:|||:    ..:
Zfish   301 LAACTNQPDMVHYLTENGHKKADLRRQDSRGNTVLHALVHIADNTRDNTRFVTKMFDLLLIKCAK 365

  Fly   303 VGTNIHIKNIQN---LTPLTLAAKLGRVEMFFHVMSIEREIY-------------WQLGSITCAA 351
            :..:.:::||.|   ::||.:|||||::.:|.|:  |.|||.             |..|.:....
Zfish   366 LYPDCNLENILNNDGMSPLMMAAKLGKIGVFQHI--IRREIKDEEARHLSRKFKDWAYGPVYSNL 428

  Fly   352 YPLLMIDTINEETGNINKDSVLNFVVFGDKLE--HLELLDGVVIDLLKTKWDTFCKSRFYKQFYM 414
            |.|..:||..||.      |||..:|:..|:|  |..|....:.:||:.||..|....||...:.
Zfish   429 YDLSSLDTCGEEV------SVLEILVYNSKIENRHEMLAVEPINELLRAKWQKFAAVTFYISVFS 487

  Fly   415 FALYFLISLFSFILRPG----PDAKDEDED----GANSTTAKSDLYRQNGSDSYHLHSKRATMTT 471
            :.:..:|.......||.    |.|.|..||    .....|..|.|:               ...|
Zfish   488 YLVTMIIFTLVAYYRPSVGKPPYAYDTTEDKVRLAGEIITVGSGLF---------------FFVT 537

  Fly   472 EYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMN---LESDLAKLRIMAELLNFVGAILYLLVA 533
            ..|..:|.                     :||.:|   ::.....|..:..:|..|.|.|||   
Zfish   538 NIKDLFLK---------------------KCPGVNSIFVDGSFQLLYFIYSVLVLVSAALYL--- 578

  Fly   534 LREARFLGLKMFIENLMTAPSRVMFLFSCALMMTIPWLRVSCLTEIDDHVTVVIMLTTAPYFLFF 598
                  .|::.::..::.|             :|:.|:..                      |:|
Zfish   579 ------SGIEAYVSVMVFA-------------LTLGWMNT----------------------LYF 602

  Fly   599 CRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFYIIFLTF--------DN-PSSPEDQ 654
            .||.|..|.:.:||.::::.||.||:.:|::|::|::.|. :..||.        :| |:.||.:
Zfish   603 TRGLKLTGTYSIMIQKILIKDLFRFLLVYVLFMIGYASAL-VSLLTICPDKDTCKENCPTYPECR 666

  Fly   655 DAESNPMPSPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAKILFFLFMVIVSVLLVNMLIAMMG 719
            |..:.     .|.::.:|.::: ..||....:...|:.....||...::::..|||:|||||:||
Zfish   667 DTNTF-----SEFLLDLFKLTI-GIGDLDNMLKGAQYPAVFLILLVTYIILTFVLLLNMLIALMG 725

  Fly   720 NTYQKIA-EIRNEWQRQWARIVLVVERSVP 748
            .|..::: |.:..|:.|||..:|.:|||.|
Zfish   726 ETVGQVSKESKKIWKLQWATTILDIERSFP 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 26/84 (31%)
ANK <131..200 CDD:238125 22/75 (29%)
ANK repeat 138..174 CDD:293786 13/48 (27%)
ANK 178..329 CDD:238125 54/169 (32%)
ANK repeat 179..229 CDD:293786 14/49 (29%)
Ank_2 184..311 CDD:289560 42/142 (30%)
ANK repeat 231..278 CDD:293786 15/49 (31%)
ANK repeat 280..311 CDD:293786 12/43 (28%)
Ion_trans 519..727 CDD:278921 51/217 (24%)
trpv4XP_005165208.1 trp 159..857 CDD:273311 176/680 (26%)
ANK repeat 247..278 CDD:293786 11/30 (37%)
ANK 248..400 CDD:238125 55/174 (32%)
ANK repeat 294..328 CDD:293786 12/33 (36%)
ANK repeat 330..364 CDD:293786 12/33 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578398
Domainoid 1 1.000 73 1.000 Domainoid score I9182
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I4007
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6594
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4284
SonicParanoid 1 1.000 - - X396
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.890

Return to query results.
Submit another query.