DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and Trpv3

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_017452952.1 Gene:Trpv3 / 497948 RGDID:1564531 Length:793 Species:Rattus norvegicus


Alignment Length:737 Identity:177/737 - (24%)
Similarity:306/737 - (41%) Gaps:199/737 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GETILHLCLLNASSLHADLAKRLLKFYPKL-ILDIYMSDE-----YYGESVLHIAIVNEDPAMVK 197
            |:|.|...|||.:....::.:.||.|..:. |||.:::.|     |.|::.|:|||......:..
  Rat   170 GKTCLMKALLNINPNTKEIVRILLAFAEENDILDRFINAEYTEEAYEGQTALNIAIERRQGDITA 234

  Fly   198 YLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVYWGEYPLSFAACLSQEE 262
            .|:.|.|||.....|.|.:                    |...::|: |:||.||:.|||.:|.|
  Rat   235 VLIAAGADVNAHAKGVFFN--------------------PKYQHEGF-YFGETPLALAACTNQPE 278

  Fly   263 CFRLVLA-RGADPDFQDTNGNTVLHMLV---------------IYEKIEMFDVGYEVGTNIHIKN 311
            ..:|::. ...|...||:.||.:||.||               :|:.|.:....:|:.|   ::|
  Rat   279 IVQLLMENEQTDITSQDSRGNNILHALVTVAEDFKTQNDFVKRMYDMILLRSGNWELET---MRN 340

  Fly   312 IQNLTPLTLAAKLGRVEMFFHVM----------SIEREIY-WQLGSITCAAYPLLMIDTINEETG 365
            ...||||.||||:|:.|:..:::          |:.|:.. |..|.::.:.|.|..:||..:   
  Rat   341 NDGLTPLQLAAKMGKAEILKYILGREIKEKPLRSLSRKFTDWAYGPVSSSLYDLTNVDTTTD--- 402

  Fly   366 NINKDSVLNFVVFGDKLEH------LELLDGVVIDLLKTKWDTFCKSRFYKQFYMFALYFLISLF 424
                :|||..:|:...:::      ||.|.    .||..||..|.|   |..|..|..||..:: 
  Rat   403 ----NSVLEIIVYNTNIDNRHEMLTLEPLH----TLLHMKWKKFAK---YMFFLSFCFYFFYNI- 455

  Fly   425 SFILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDPSEV 489
                                                       |:|         ...||.|.|.
  Rat   456 -------------------------------------------TLT---------LVSYYRPRED 468

  Fly   490 EVLPAWWESYAQCPLMNLESDLAKLRIMAELLNFV---------GAILYLL------VALREARF 539
            |.||.        ||. |...::.|:::..:...:         |..::||      ..|.:|.|
  Rat   469 EALPH--------PLA-LTHKMSWLQLLGRMFVLIWAMCISVKEGIAIFLLRPSDLQSILSDAWF 524

  Fly   540 LGLKMFIENLMTAPSRVMFLF------SC-ALMMTIPWLRVSCLTEIDDHVTVVIMLTTAPYFLF 597
             ....|::.::...|..::||      :| .|.|.:.|..:                      |:
  Rat   525 -HFVFFVQAVLVILSVFLYLFAYKEYLACLVLAMALGWANM----------------------LY 566

  Fly   598 FCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFYIIFLTFDNPSSPEDQDAESNPMP 662
            :.|||:::|.:.|||.::::.|:|:|:.:|::|::||..|...:.    ...|.:.:|..|  ..
  Rat   567 YTRGFQSMGMYSVMIQKVILHDVLKFLFVYILFLLGFGVALASLI----EKCSKDKKDCSS--YG 625

  Fly   663 SPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAKILFFL--FMVIVSVLLVNMLIAMMGNTYQKI 725
            |..::::.:|.::: ..||......||   |....||.|  ::::..|||:|||||:||.|.:.:
  Rat   626 SFSDAVLELFKLTI-GLGDLNIQQNST---YPILFLFLLITYVILTFVLLLNMLIALMGETVENV 686

  Fly   726 A-EIRNEWQRQWARIVLVVERSVPPAERLKNFMQYSQSMSDGRRALVLRLNMTE--EEKEEMKEV 787
            : |....|:.|.||.:|..|:.:|...|.:..|.....::|....|.||:|..:  |.|..:..:
  Rat   687 SKESERIWRLQRARTILEFEKMLPEWLRSRFRMGELCKVADEDFRLCLRINEVKWTEWKTHVSFL 751

  Fly   788 QEMKRIHQRFAKKRQMEREARA 809
            .|.....:|.|...:::..:|:
  Rat   752 NEDPGPIRRTADSNKIQDSSRS 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 24/75 (32%)
ANK <131..200 CDD:238125 19/66 (29%)
ANK repeat 138..174 CDD:293786 12/35 (34%)
ANK 178..329 CDD:238125 49/166 (30%)
ANK repeat 179..229 CDD:293786 12/49 (24%)
Ank_2 184..311 CDD:289560 37/142 (26%)
ANK repeat 231..278 CDD:293786 14/47 (30%)
ANK repeat 280..311 CDD:293786 10/45 (22%)
Ion_trans 519..727 CDD:278921 54/232 (23%)
Trpv3XP_017452952.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338793
Domainoid 1 1.000 75 1.000 Domainoid score I8820
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8914
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.810

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