DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and Trpv3

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_659567.2 Gene:Trpv3 / 246788 MGIID:2181407 Length:791 Species:Mus musculus


Alignment Length:739 Identity:180/739 - (24%)
Similarity:307/739 - (41%) Gaps:203/739 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GETILHLCLLNASSLHADLAKRLLKFYPKL-ILDIYMSDE-----YYGESVLHIAIVNEDPAMVK 197
            |:|.|...|||.:....::.:.||.|..:. |||.:::.|     |.|::.|:|||......:..
Mouse   168 GKTCLMKALLNINPNTKEIVRILLAFAEENDILDRFINAEYTEEAYEGQTALNIAIERRQGDITA 232

  Fly   198 YLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVYWGEYPLSFAACLSQEE 262
            .|:.|.|||.....|.|.:                    |...::|: |:||.||:.|||.:|.|
Mouse   233 VLIAAGADVNAHAKGVFFN--------------------PKYQHEGF-YFGETPLALAACTNQPE 276

  Fly   263 CFRLVLA-RGADPDFQDTNGNTVLHMLV---------------IYEKIEMFDVGYEVGTNIHIKN 311
            ..:|::. ...|...||:.||.:||.||               :|:.|.:....:|:.|   ::|
Mouse   277 IVQLLMENEQTDITSQDSRGNNILHALVTVAEDFKTQNDFVKRMYDMILLRSGNWELET---MRN 338

  Fly   312 IQNLTPLTLAAKLGRVEMFFHVMSIEREIY-------------WQLGSITCAAYPLLMIDTINEE 363
            ...||||.||||:|:.|:..:::|  |||.             |..|.::.:.|.|..:||..: 
Mouse   339 NDGLTPLQLAAKMGKAEILKYILS--REIKEKPLRSLSRKFTDWAYGPVSSSLYDLTNVDTTTD- 400

  Fly   364 TGNINKDSVLNFVVFGDKLEH------LELLDGVVIDLLKTKWDTFCKSRFYKQFYMFALYFLIS 422
                  :|||..:|:...:::      ||.|.    .||.|||..|.|   |..|..|..||..:
Mouse   401 ------NSVLEIIVYNTNIDNRHEMLTLEPLH----TLLHTKWKKFAK---YMFFLSFCFYFFYN 452

  Fly   423 LFSFILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDPS 487
            :                                            |:|         ...||.|.
Mouse   453 I--------------------------------------------TLT---------LVSYYRPR 464

  Fly   488 EVEVLPAWWESYAQCPLMNLESDLAKLRIMAELLNFV---------GAILYLL------VALREA 537
            |.|.||.        ||. |...::.|:::..:...:         |..::||      ..|.:|
Mouse   465 EDEDLPH--------PLA-LTHKMSWLQLLGRMFVLIWATCISVKEGIAIFLLRPSDLQSILSDA 520

  Fly   538 RFLGLKMFIENLMTAPSRVMFLF------SC-ALMMTIPWLRVSCLTEIDDHVTVVIMLTTAPYF 595
            .| ....|::.::...|..::||      :| .|.|.:.|..:                      
Mouse   521 WF-HFVFFVQAVLVILSVFLYLFAYKEYLACLVLAMALGWANM---------------------- 562

  Fly   596 LFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFYIIFLTFDNPSSPEDQDAESNP 660
            |::.|||:::|.:.|||.::::.|:|:|:.:|::|::||..|...:.    ...|.:.:|..|  
Mouse   563 LYYTRGFQSMGMYSVMIQKVILHDVLKFLFVYILFLLGFGVALASLI----EKCSKDKKDCSS-- 621

  Fly   661 MPSPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAKILFFL--FMVIVSVLLVNMLIAMMGNTYQ 723
            ..|..::::.:|.::: ..||......||   |....||.|  ::::..|||:|||||:||.|.:
Mouse   622 YGSFSDAVLELFKLTI-GLGDLNIQQNST---YPILFLFLLITYVILTFVLLLNMLIALMGETVE 682

  Fly   724 KIA-EIRNEWQRQWARIVLVVERSVPPAERLKNFMQYSQSMSDGRRALVLRLNMTE--EEKEEMK 785
            .:: |....|:.|.||.:|..|:.:|...|.:..|.....::|....|.||:|..:  |.|..:.
Mouse   683 NVSKESERIWRLQRARTILEFEKMLPEWLRSRFRMGELCKVADEDFRLCLRINEVKWTEWKTHVS 747

  Fly   786 EVQEMKRIHQRFAKKRQMEREARA 809
            .:.|.....:|.|...:::..:|:
Mouse   748 FLNEDPGPIRRTADLNKIQDSSRS 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 24/75 (32%)
ANK <131..200 CDD:238125 19/66 (29%)
ANK repeat 138..174 CDD:293786 12/35 (34%)
ANK 178..329 CDD:238125 49/166 (30%)
ANK repeat 179..229 CDD:293786 12/49 (24%)
Ank_2 184..311 CDD:289560 37/142 (26%)
ANK repeat 231..278 CDD:293786 14/47 (30%)
ANK repeat 280..311 CDD:293786 10/45 (22%)
Ion_trans 519..727 CDD:278921 54/232 (23%)
Trpv3NP_659567.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..113
trp 123..753 CDD:273311 177/719 (25%)
ANK repeat 168..201 CDD:293786 10/32 (31%)
ANK repeat 214..245 CDD:293786 10/30 (33%)
ANK 1 214..243 10/28 (36%)
ANK repeat 261..293 CDD:293786 11/31 (35%)
ANK 2 261..291 11/29 (38%)
ANK 3 340..369 14/30 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835192
Domainoid 1 1.000 76 1.000 Domainoid score I8918
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8679
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4284
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.840

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