DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and Trpv2

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001369418.1 Gene:Trpv2 / 22368 MGIID:1341836 Length:756 Species:Mus musculus


Alignment Length:750 Identity:181/750 - (24%)
Similarity:304/750 - (40%) Gaps:207/750 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YNKGAGRYFPISKLVLLRNRDRPRTRQLPEIRALENPDDDFNIHDYCPEVSEAEYISNPTAYRFV 128
            |.||.|   |..:.....:|||     |..:.:...|::...:.:|....|  :|::: :||   
Mouse    56 YRKGLG---PSQQDPNRFDRDR-----LFSVVSRGVPEELTGLLEYLRRTS--KYLTD-SAY--- 106

  Fly   129 CWDLNMRGAVGETIL-----------HLCLLNASSLHADLAKRLLKFYPKLILDIYMSDEYY-GE 181
                 ..|:.|:|.|           :.|:|....:..|...      |:.:::...:||:| |.
Mouse   107 -----TEGSTGKTCLMKAVLNLQDGVNACILPLLQIDRDSGN------PQPLVNAQCTDEFYRGH 160

  Fly   182 SVLHIAIVNEDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVY 246
            |.|||||.......||.|::..|:|..|.||.|.              .::...|        .|
Mouse   161 SALHIAIEKRSLWCVKLLVENGANVHIRACGRFF--------------QKHQGTC--------FY 203

  Fly   247 WGEYPLSFAACLSQEECFRLVLARGADP---DFQDTNGNTVLHMLVIYEK---------IEMFDV 299
            :||.|||.|||..|.:....:|.....|   :..|:.||||||.||:...         |.|:|.
Mouse   204 FGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDS 268

  Fly   300 GYEVGTNI-------HIKNIQNLTPLTLAAKLGRVEMFFHVMSIERE---IY---------WQLG 345
            ..::|..:       .|.|.|.||||.||||.|::|:|.|:  ::||   :|         |..|
Mouse   269 LLQMGARLCPTVQLEDICNHQGLTPLKLAAKEGKIEIFRHI--LQREFSGLYQPLSRKFTEWCYG 331

  Fly   346 SITCAAYPLLMIDTINEETGNINKDSVLNFVVFGDKLEHLELLDGVVID----LLKTKWDTFCKS 406
            .:..:.|.|..:|       :..|:|||..:.|..|..|...:  ||::    ||:.|||... .
Mouse   332 PVRVSLYDLSSVD-------SWEKNSVLEIIAFHCKSPHRHRM--VVLEPLNKLLQEKWDRLI-P 386

  Fly   407 RFYKQFYMFALYFLISLFSFILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHLHSKRATMTT 471
            ||:..|..:.:|.:|  |:.:                                            
Mouse   387 RFFFNFACYLVYMII--FTIV-------------------------------------------- 405

  Fly   472 EYKTFWLNFTEYYDPS-EVEVLPAWWESYAQCPLMNLESDLAKLRIMAELLNFVGAILYLLVAL- 534
                      .|:.|| |...:|:...::....|           ::..:|..:|.|..||..| 
Mouse   406 ----------AYHQPSLEQPAIPSSKATFGDSML-----------LLGHILILLGGIYLLLGQLW 449

  Fly   535 ---REARFLGLKMFIENLMTAPSRVMFLFSCALMMTIPWLRVSCLTEIDDHVTVVIMLTTAPY-- 594
               |...|:.:     :.|.:...::||....|.:....||   ..|.:.::.:::......:  
Mouse   450 YFWRRRLFIWI-----SFMDSYFEILFLVQALLTVLSQVLR---FVETEWYLPLLVSSLVLGWLN 506

  Fly   595 FLFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFYIIFLTFDNPSSPEDQDA--- 656
            .|::.|||:..|.:.|||.::::.|||||:.:||||:.||:.|...:.....:|.:|||.:.   
Mouse   507 LLYYTRGFQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSREARSPKAPEDSNTTVT 571

  Fly   657 -------ESNPMP--SPMESIVAMFLMSLTNFGDYYGAMVSTQHEYEAKILFFL--FMVIVSVLL 710
                   |..|:|  ..:::.:.:|..:: ..|:   .....|..:...:|..|  ::::..|||
Mouse   572 EKPTLGQEEEPVPYGGILDASLELFKFTI-GMGE---LAFQEQLRFRGVVLLLLLAYVLLTYVLL 632

  Fly   711 VNMLIAMMGNTYQKIA-EIRNEWQRQWARIVLVVE 744
            :|||||:|..|...:| :..:.|:.|.|..||.:|
Mouse   633 LNMLIALMSETVNSVATDSWSIWKLQKAISVLEME 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 23/89 (26%)
ANK <131..200 CDD:238125 20/80 (25%)
ANK repeat 138..174 CDD:293786 7/46 (15%)
ANK 178..329 CDD:238125 55/170 (32%)
ANK repeat 179..229 CDD:293786 17/50 (34%)
Ank_2 184..311 CDD:289560 41/145 (28%)
ANK repeat 231..278 CDD:293786 13/49 (27%)
ANK repeat 280..311 CDD:293786 13/46 (28%)
Ion_trans 519..727 CDD:278921 58/228 (25%)
Trpv2NP_001369418.1 Required for interaction with SLC50A1. /evidence=ECO:0000250 1..385 105/386 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
TRPV2 66..705 CDD:411981 175/736 (24%)
ANK repeat 112..154 CDD:293786 7/47 (15%)
ANK repeat 158..189 CDD:293786 12/30 (40%)
ANK repeat 204..238 CDD:293786 11/33 (33%)
ANK repeat 240..274 CDD:293786 11/33 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..583 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 719..756
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835194
Domainoid 1 1.000 76 1.000 Domainoid score I8918
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48943
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.820

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