DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and Trpv6

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_446138.2 Gene:Trpv6 / 114246 RGDID:69335 Length:727 Species:Rattus norvegicus


Alignment Length:703 Identity:191/703 - (27%)
Similarity:323/703 - (45%) Gaps:131/703 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 RFVCWDLNMRGAVGETILHLCLLNASSLHADLAKRLLKFYPKLILDIYMSDEYYGESVLHIAIVN 190
            :|...:::.:||:|||.||:..| ..:|.|  |..|::..|:|:.:...|:.|.|::.||||::|
  Rat    66 KFEGCEVHQKGAMGETALHIAAL-YDNLEA--AMVLMEAAPELVFEPMTSELYEGQTALHIAVIN 127

  Fly   191 EDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNY--DGYVYWGEYPLS 253
            ::..:|:.||...|.|..|..|:                        :.:|  ...:|:||:|||
  Rat   128 QNVNLVRALLARGASVSARATGS------------------------VFHYRPHNLIYYGEHPLS 168

  Fly   254 FAACLSQEECFRLVLARGADPDFQDTNGNTVLHMLVI----------YEKIEMFDVGYEVGTNIH 308
            ||||:..||..||::..|||...||:.||||||:|::          |..:..:|.|..:.:...
  Rat   169 FAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLEL 233

  Fly   309 IKNIQNLTPLTLAAKLGRVEMFFHVMSIEREIYWQLGSITCAAYPLLMIDTINEETGNINKDSVL 373
            :.|.|.|||..||...|.:.||.|:|...:.|.|..|.:|...|.|..||:..::      .|:|
  Rat   234 VPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIQWTYGPLTSTLYDLTEIDSSGDD------QSLL 292

  Fly   374 NFVVFGDKLEHLELLDGV-VIDLLKTKWDTFCKSRFYKQFYMFALYFLISLFSFILRP-GPDAKD 436
            ..:|...|.|..::||.. |.:|:..||..:.:..|.....::.||.:......:.|| .|...:
  Rat   293 ELIVTTKKREARQILDQTPVKELVSLKWKRYGRPYFCVLGAIYVLYIICFTMCCVYRPLKPRITN 357

  Fly   437 EDEDGANSTTAKSDLYRQNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQ 501
                            |.|..|:..|..|            |....|..|.:             
  Rat   358 ----------------RTNPRDNTLLQQK------------LLQEAYVTPKD------------- 381

  Fly   502 CPLMNLESDLAKLRIMAELLNFVGAILYLLVALREARFLGL-KMFIENLMTAPSRVMFL-FSCAL 564
                       .||::.||::.|||::.|||.:.:...||: :.|.:.::..|..|:.: ::..:
  Rat   382 -----------DLRLVGELVSIVGAVIILLVEIPDIFRLGVTRFFGQTILGGPFHVIIVTYAFMV 435

  Fly   565 MMTIPWLRVSCLTEIDDHVTVVIMLTTAPY--FLFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIY 627
            ::|:    |..||..|..|..:.......:  .::|.|||:.:|||.:||.:|:.|||:||..:.
  Rat   436 LVTM----VMRLTNSDGEVVPMSFALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLM 496

  Fly   628 LVFVMGFSQAFYIIFLTFDNPSSPEDQDAESNPMPSPME--SIVAMFLMSLTNFGDYYGAMVSTQ 690
            .|.::||:.||||||.|       ||.|...:....||.  |...:||..:....:|     ...
  Rat   497 AVVILGFASAFYIIFQT-------EDPDELGHFYDYPMALFSTFELFLTIIDGPANY-----DVD 549

  Fly   691 HEYEAKILFFLFMVIVSVLLVNMLIAMMGNTYQKIAEIRNE-WQRQWARIVLVVERSVPPAERLK 754
            ..:...|.:..|.:|.::|::|:||||||:|:.::|..|:| |:.|.....:::||.:|..    
  Rat   550 LPFMYSITYAAFAIIATLLMLNLLIAMMGDTHWRVAHERDELWRAQVVATTVMLERKLPRC---- 610

  Fly   755 NFMQYSQSMSDGRR-ALVLRLNMTEEEKEEMKEVQEMKRIHQRFAKKRQMERE 806
               .:.:|...||. .|..|..:..|:::::.. |.::|..|.|.::..:..|
  Rat   611 ---LWPRSGICGREYGLGDRWFLRVEDRQDLNR-QRIRRYAQAFQQQDDLYSE 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 27/77 (35%)
ANK <131..200 CDD:238125 23/68 (34%)
ANK repeat 138..174 CDD:293786 12/35 (34%)
ANK 178..329 CDD:238125 52/162 (32%)
ANK repeat 179..229 CDD:293786 13/49 (27%)
Ank_2 184..311 CDD:289560 42/138 (30%)
ANK repeat 231..278 CDD:293786 18/48 (38%)
ANK repeat 280..311 CDD:293786 10/40 (25%)
Ion_trans 519..727 CDD:278921 65/213 (31%)
Trpv6NP_446138.2 TRPV5-6 29..636 CDD:411976 186/677 (27%)
ANK repeat 46..76 CDD:293786 1/9 (11%)
ANK repeat 78..110 CDD:293786 12/34 (35%)
ANK repeat 116..147 CDD:293786 11/30 (37%)
ANK repeat 162..193 CDD:293786 16/30 (53%)
ANK repeat 195..225 CDD:293786 9/29 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338794
Domainoid 1 1.000 110 1.000 Domainoid score I6174
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I3382
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 1 1.000 - - FOG0001377
OrthoInspector 1 1.000 - - mtm8914
orthoMCL 1 0.900 - - OOG6_105955
Panther 1 1.100 - - O PTHR10582
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X396
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.760

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