DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and LOC101734375

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_012818875.2 Gene:LOC101734375 / 101734375 -ID:- Length:673 Species:Xenopus tropicalis


Alignment Length:679 Identity:194/679 - (28%)
Similarity:311/679 - (45%) Gaps:130/679 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RGAVGETILHLCLLNASSLHADLAKRLLKFYPKLILDIYMSDEYYGESVLHIAIVNEDPAMVKYL 199
            ||::||||||:.:||..   .:|||.:|:..|.|:.:...||.|.||:.|||||:.||...||.|
 Frog    74 RGSLGETILHIAVLNGK---RELAKVILENVPTLVNNAMTSDMYKGETALHIAILKEDIESVKLL 135

  Fly   200 LDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVYWGEYPLSFAACLSQEECF 264
            |...|||        ::|..|             ..|.:.......|:||||||||||...:|..
 Frog   136 LKYGADV--------INARAT-------------GTCFVPGKKSLCYFGEYPLSFAACTGHKEIT 179

  Fly   265 RLVLA-RGADPDFQDTNGNTVLHMLVIYEKIEMFDVGYEVGTNI----------HIKNIQNLTPL 318
            :|:|. ..|..:.||:.||||||:||:....|:..:.||:...:          |::|....|.|
 Frog   180 KLILVDHNAPVNAQDSLGNTVLHILVLQPNKELACLMYEMILALVPLKDSHCVEHLQNNDGFTTL 244

  Fly   319 TLAAKLGRVEMFFHVMSIEREIYWQLGSITCAAYPLLMIDTINEETGNINKDSVLNFVVFGDKLE 383
            .|||..|.:|||.:::..::.|||.:|:::.:.|.|..|||.:.|.      |||:.:......:
 Frog   245 NLAANEGDMEMFNYLIKKQKAIYWTIGTVSYSIYNLTDIDTWDTER------SVLDIITSNKSSK 303

  Fly   384 HLELLDGVVI-DLLKTKWDTFCKSRFYKQFYMFALYFLISLFSFILRPGPDAKDEDEDGANSTTA 447
            ..:|:|...| :||..||..|.:..|......:.||.|:.....:.||           .|:.| 
 Frog   304 VCKLIDVTPIKELLNLKWKLFGRKNFLIWMISYLLYMLVFTTVSMFRP-----------FNTVT- 356

  Fly   448 KSDLYRQNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMNLESDLA 512
                                             |..::.:.|.||    :|| ||     :.|. 
 Frog   357 ---------------------------------TNQFNNTHVTVL----DSY-QC-----KGDF- 377

  Fly   513 KLRIMAELLNFVGAILYLLVALREARFLGLKMFIENLMT-APSRVMFLFSCALMMTIPWLRVSCL 576
             ||:..||:..:||::..:..:.....||.|::|.|..| .|..::.:....|:.:...|||.| 
 Frog   378 -LRLTGELITLLGALVIFISEIPLLIKLGPKIYIGNASTGGPFSLLMVGYSILIFSAAILRVLC- 440

  Fly   577 TEIDDHVTVVIMLTTAPYF-----LFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQ 636
                 |...||.|:.|...     ::|.||||.:|.|.:||.:::..||..:..:..:.::|||.
 Frog   441 -----HEGEVIPLSLALIIGWCNSIYFARGFKMLGQFSIMIQKIIFADLFPWFCLVFIIIVGFSS 500

  Fly   637 AFYIIFLTFDNPSSPEDQDAESNPMPSPMESIVAM-FLMSLTNFGDYYGAMVSTQHEYEAKILFF 700
            |||::..|.       :.|:.|:....||....|: .:|.|::|.  :....:....|   |.:.
 Frog   501 AFYVMCQTL-------ELDSNSHLKDYPMTIYAAIEMMMGLSSFP--FPMDKAPPFLY---ITYT 553

  Fly   701 LFMVIVSVLLVNMLIAMMGNTYQKIAEIRNE-WQRQWARIVLVVERSVPPAERLKNFMQ-YSQSM 763
            ::||.|.:|:.|||||.|.:|:.:||..|.. |:.|.|..:|::||.:|...:.::.:. .|..:
 Frog   554 VYMVFVYLLMTNMLIAKMEDTFWRIAHEREVLWKIQIAATILLLERHIPRCLKTRSGISGKSLGL 618

  Fly   764 SDGRRAL----VLRLNMTEEEKEEMKEVQ 788
            .|.:..:    :|..|..|..:..:|..|
 Frog   619 DDDKWYIGVEEILNENAPENSQAAVKPTQ 647

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 35/73 (48%)
ANK <131..200 CDD:238125 30/64 (47%)
ANK repeat 138..174 CDD:293786 14/35 (40%)
ANK 178..329 CDD:238125 56/161 (35%)
ANK repeat 179..229 CDD:293786 18/49 (37%)
Ank_2 184..311 CDD:289560 46/137 (34%)
ANK repeat 231..278 CDD:293786 16/47 (34%)
ANK repeat 280..311 CDD:293786 12/40 (30%)
Ion_trans 519..727 CDD:278921 61/214 (29%)
LOC101734375XP_012818875.2 TRPV 12..630 CDD:424068 189/660 (29%)