DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and trpv4l

DIOPT Version :10

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_017950397.2 Gene:trpv4l / 100494662 XenbaseID:XB-GENE-22066240 Length:1014 Species:Xenopus tropicalis


Alignment Length:807 Identity:198/807 - (24%)
Similarity:324/807 - (40%) Gaps:241/807 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TKVEPFLYNKGAGRYFP-ISKLV--LLRNRDRPRTRQLPEIRALENPDDDFNIHDYCPEVSEAEY 118
            |:|.|:...:|....:| |.||.  |.....|....:|.|:|.|     .|.:|:. .::::.|:
 Frog   295 TEVTPYDPRRGPYPDYPDIKKLKEHLFDIVSRGSAAELEELRLL-----PFLLHEK-KQLTDEEF 353

  Fly   119 ISNPTAYRFVCWDLNMRGAVGETILHLCLLNASSLHADLAKRLLKF------YPKLILDIYMSDE 177
            :.:.|               |:|.|...|::.::...|....|:..      .|:.|...::  :
 Frog   354 LEDST---------------GKTCLSKALMHLNNGKNDTIPILIYIATITINVPQFINSPFL--K 401

  Fly   178 YY-GESVLHIAIVNEDPAMVKYLLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNY 241
            || |::.|||||.......|:.|:...|||..:..|.|...:|.                     
 Frog   402 YYDGQTALHIAIERRCKDYVELLVQNGADVHAQAKGRFFQPKDE--------------------- 445

  Fly   242 DGYVYWGEYPLSFAACLSQEECFRLV---LARGADPDFQDTNGNTVLHMLVIYEK---------I 294
            .||.|:||.|||.|||.:|.:....:   :...||...:|:.||||||.||....         .
 Frog   446 GGYFYFGELPLSLAACTNQPDIVDYLTENVYNKADLCRRDSRGNTVLHALVAIADNTPENTKFVT 510

  Fly   295 EMFDVGYEVGTNIHIK--------------NIQNLTPLTLAAKLGRVEMFFHVMSIE------RE 339
            ||:|       ::.||              |...::||.:||:||::::|.|::.:|      |.
 Frog   511 EMYD-------HLVIKCAKLNKESSLETVTNNDKMSPLMMAAQLGKIDIFQHIIQLEIKDEEARH 568

  Fly   340 IY-----WQLGSITCAAYPLLMIDTINEETGNINKDSVLNFVVFGD--KLEHLELLDGVVIDLLK 397
            :.     |..|.:..:.|.|..:||.  |.|    ||||..:|:..  |..|..|....:.:|||
 Frog   569 LSRKFRDWTYGPVYSSLYDLTTLDTY--EDG----DSVLEILVYKSTAKNRHEMLAVEPINELLK 627

  Fly   398 TKWDTFCKSRFYKQFYMFALYFLISLFSFILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHL 462
            .||..|....||..|  ||..||:.:|:.:                                   
 Frog   628 EKWKKFGAVLFYLSF--FAYLFLMIIFTLV----------------------------------- 655

  Fly   463 HSKRATMTTEYKTFWLNFTEYYDPSEVEVLPAWWESYAQCPLMNLESDLAKLRIMAELLNFVGAI 527
                               .||.|  :|..|.:                 ..|...:.|..||.|
 Frog   656 -------------------AYYRP--MEGTPPY-----------------PYRTTTDHLRLVGEI 682

  Fly   528 LYLLVALREARFLGLKMFIENLMTAPSR----------------VMFLFSCALMMTIPWLRVSCL 576
            :.|||        |:..||.|:.....:                :.|::|..:::|    .:..|
 Frog   683 VILLV--------GIVFFIANIKDLIMKKYPGVYSLFTEGCFQLLNFIYSVLVLLT----AILYL 735

  Fly   577 TEIDDHVTVVIMLTTAPYF--LFFCRGFKTVGPFVVMIYRMVMGDLLRFVSIYLVFVMGFSQAFY 639
            ..|:.::.|:::.....:.  |:|.||.|..|.:.||:.:::..||.||:.:||:|::|::.|..
 Frog   736 AGIEAYLAVMVIALVLGWINALYFTRGLKLTGMYSVMLQKVLFKDLFRFLLVYLLFMVGYASALV 800

  Fly   640 IIFLTFDNPSSPE--DQDAESN----PMPSPMESI----VAMFLMSLT-NFGDYYGAMVSTQHEY 693
            .:.    ||.:.|  ..|.:.|    ..||...|.    :.:.|.:|| ..||   ..|.:..:|
 Frog   801 SLL----NPCTNEMICNDGQENCTVPENPSCQHSTTFSRLLLNLFTLTIGMGD---LEVISHAKY 858

  Fly   694 EAK--ILFFLFMVIVSVLLVNMLIAMMGNTYQKIA-EIRNEWQRQWARIVLVVERSVPPAERLKN 755
            .|.  ||...:::|..|||:|||||:||.|..::: |.:..||.|||..:|.:||.:|.      
 Frog   859 PAVFIILLVTYLIITFVLLLNMLIALMGETVGEVSKESKQIWQLQWATTILDIERYLPA------ 917

  Fly   756 FMQYSQSMSDGRRALVLRLNMTEEEKE 782
            ||:  ::...| .|:::.|...:|:.|
 Frog   918 FMR--KAFRSG-EAVIIGLKQNKEQDE 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 TRPV 131..748 CDD:454755 172/694 (25%)
ANK repeat 138..174 CDD:293786 8/41 (20%)
ANK repeat 179..229 CDD:293786 15/50 (30%)
ANK repeat 231..278 CDD:293786 14/49 (29%)
ANK repeat 280..311 CDD:293786 13/53 (25%)
trpv4lXP_017950397.2 TRPV 281..968 CDD:454755 198/807 (25%)
ANK repeat 359..402 CDD:293786 8/44 (18%)
ANK repeat 404..435 CDD:293786 11/30 (37%)
ANK repeat 451..485 CDD:293786 11/33 (33%)
ANK repeat 487..526 CDD:293786 13/45 (29%)

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