DRSC/TRiP Functional Genomics Resources

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Protein Alignment nan and trpv3

DIOPT Version :9

Sequence 1:NP_001261833.1 Gene:nan / 39571 FlyBaseID:FBgn0036414 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_031751640.1 Gene:trpv3 / 100487056 XenbaseID:XB-GENE-1013149 Length:778 Species:Xenopus tropicalis


Alignment Length:748 Identity:190/748 - (25%)
Similarity:328/748 - (43%) Gaps:172/748 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KLVLLRNRDRPRTRQLPEIRALENPDDDFNIHDYCPEVSEAEYISNPT-AYRFVCWDLNMRGAVG 139
            |..|.||..:|..:.|  .:|:...|.:. :.|...|...:..:.:.| |..|....|..:. .|
 Frog    93 KPALTRNTRKPTKKLL--FKAVSEGDTEM-LTDLLSEAKSSSRVYSVTQAKEFFMHKLTSKD-TG 153

  Fly   140 ETILHLCLLNASSLHADLAKRLLKFYPKL-ILDI-----YMSDEYYGESVLHIAIVNEDPAMVKY 198
            :|.|...|||.:....::.:.||.|..:. ||:.     |..:.|.|::.|:|||......:|||
 Frog   154 KTCLMKALLNINEKTPEVVRSLLTFAEENDILETFINAEYTEENYKGQTALNIAIERRQVELVKY 218

  Fly   199 LLDANADVQERCCGAFMSAEDTKFSRTDSPDHEYVALCPMTNYDGYVYWGEYPLSFAACLSQEEC 263
            |::..|.:..|..|.|.:                    |...|:|: |:||.||:.|||.:|.|.
 Frog   219 LIEKGAKIDVRAQGRFFN--------------------PKNKYEGF-YFGETPLALAACTNQPEI 262

  Fly   264 FRLVLARGAD-PDFQDTNGNTVLHMLV-IYEKIE--------MFDVGYEVGTNIHIKNIQN---L 315
            .:|::.:... ...||:.||||||.|| :.:..|        |:|.......|..::.|.|   |
 Frog   263 VQLIMDKSPTIGTIQDSLGNTVLHALVNVADNSEAQNDFIIGMYDTILRNCKNKSLEQIPNNEGL 327

  Fly   316 TPLTLAAKLGRVEMFFHVMSIEREIY-------------WQLGSITCAAYPLLMIDTINEETGNI 367
            |.:.||||||:.|:..:::|  |||.             |..|.::.:.|.|..|||       .
 Frog   328 TSMQLAAKLGKTEILHYILS--REIKEKENMVLSRKFTDWAYGPVSSSLYDLTSIDT-------C 383

  Fly   368 NKDSVLNFVVFGDKLEH------LELLDGVVIDLLKTKWDTFCKSRFYKQFYMFALYFLISLFSF 426
            ..:|||..||:...:::      ||.|.    .||:.||..|.:       |||.|.||:|.   
 Frog   384 WPNSVLEIVVYNTDIDNRHELLTLEPLH----TLLQMKWKKFAR-------YMFFLSFLLSF--- 434

  Fly   427 ILRPGPDAKDEDEDGANSTTAKSDLYRQNGSDSYHLHSKRATMTTEYKTFWLNFTEYYDP-SEVE 490
                                            :|::.              |....||.| .|.:
 Frog   435 --------------------------------TYNIA--------------LTLVSYYRPRGEQD 453

  Fly   491 VLPAWWESYAQCPLMNLESDLAKLRIMAELLNFVGAILYLLVALREARFLGLKMFIENLMT-APS 554
            |.|           :||..:...|:::.::...|.| .||:|......||..:..:::::: |..
 Frog   454 VYP-----------LNLSYENGWLQLVGQMFIIVCA-TYLMVKEAVVMFLVKQSDLKSVLSDAWF 506

  Fly   555 RVMFLFSCALMMTIPWLRVSC-LTEIDDHVTVVIMLTTAPY--FLFFCRGFKTVGPFVVMIYRMV 616
            .::|.....|::    :.|.| |..:|.::..:::.....:  .|::.|||:::|.:.|||.:::
 Frog   507 HILFFIQAVLVI----VSVFCYLFGVDFYLVFLVLAMALGWMNLLYYTRGFQSLGIYSVMIQKVI 567

  Fly   617 MGDLLRFVSIYLVFVMGFSQAFYIIFLTFDNPSSPEDQDAESNPMPSPMESIVAMFLMSLTNFGD 681
            :.|:|:|:.:|::|::||..|...:   .:|....|:..:.|.       :|:.:|.:::    .
 Frog   568 LNDVLKFLFVYILFLLGFGVALASL---LENCEDGEECQSLST-------AILELFELTI----G 618

  Fly   682 YYGAMVSTQHEYEAKILFFL--FMVIVSVLLVNMLIAMMGNTYQKIA-EIRNEWQRQWARIVLVV 743
            ..|..:....:|....||.|  |:::..|||:|||||:||.|.:||: |..:.|:.|.||.:|..
 Frog   619 LRGLEMDKDPKYPVLFLFLLITFVILTFVLLLNMLIALMGETVEKISQESEHIWRLQRARTILEF 683

  Fly   744 ERSVPPAERLKNFMQYSQSMSDG-RRALVLRLN 775
            |:|:|...:.:..:..|.::|.| ...:.||:|
 Frog   684 EKSLPAWLQARFQLGESCTVSKGDNNRICLRIN 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanNP_001261833.1 Ank_2 <131..209 CDD:289560 24/83 (29%)
ANK <131..200 CDD:238125 22/74 (30%)
ANK repeat 138..174 CDD:293786 11/41 (27%)
ANK 178..329 CDD:238125 52/163 (32%)
ANK repeat 179..229 CDD:293786 13/49 (27%)
Ank_2 184..311 CDD:289560 40/136 (29%)
ANK repeat 231..278 CDD:293786 14/47 (30%)
ANK repeat 280..311 CDD:293786 12/39 (31%)
Ion_trans 519..727 CDD:278921 54/214 (25%)
trpv3XP_031751640.1 TRPV3 58..736 CDD:411978 190/748 (25%)
ANK repeat 108..151 CDD:293786 9/45 (20%)
ANK repeat 153..197 CDD:293786 12/43 (28%)
ANK repeat 200..230 CDD:293786 10/29 (34%)
ANK repeat 246..278 CDD:293786 10/31 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7950
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9325
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4284
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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