Protein Alignment D and sox1

DIOPT Version :9

• Sequence 1: NP_001261830.1
• Gene: D / 39570
• FlyBaseID: FBgn0000411
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001074465.1
• Gene: sox1 / 779569
• XenbaseID: XB-GENE-1018269
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 340
• Identity: 125/340 - (36%)
• Similarity: 156/340 - (45%)
• Gaps: 101/340 - (29%)

  Fly   104 SLGSQSSLGSNGSGLNSSSGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMH 168
            |:..::.|.|.|....|::|....|    ..:...:..:||||||||||||.|||::|::|||||
 Frog     3 SMMMETDLHSPGVQPPSNTGQTGGG----GGNKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMH 63

  Fly   169 NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGP---QGGLQ 230
            |||||||||||||:::|:||||||||||||||||||||||||||||||.|..|....   .|||.
 Frog    64 NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLL 128

  Fly   231 MQAGG--MG----------------QQKL--------------------GAGPGA---------- 247
            ..|||  ||                .|:|                    ||.||:
 Frog   129 HAAGGGHMGVGLSPGGGGGGTGGVVVQRLESPGSGASAGGYAHMNGWANGAYPGSVAAAAAAAMM 193

  Fly   248 ---------------GAGGYNPFHQLP--PYFAPSHHLDQGYPVPY--------FGGFDPLAL-- 285
                           |:||::|.|. |  |:..|.||.... |.|:        ...:|..||
 Frog   194 QEAQLAYSQQQQQHPGSGGHHPHHH-PHHPHHHPHHHPHHN-PTPHPPPPPPQPMHRYDMSALQY 256

  Fly   286 SKLHQSQAAAAAAVNNQG-------QQQGQAPPQLPPTSLSSFYSGIYSGISAPSLYAAHSANAA 343
            |.|..:|....|:.:..|       |||.|..|.          |...:..:|.:..||.|:.|.
 Frog   257 SPLPGAQTYMTASPSGYGALGYSSSQQQHQGSPS----------SAAVAAAAAAAAAAAASSGAL 311

  Fly   344 GLYPSSSTSSPGSSP 358
            |...|...|.|..||
 Frog   312 GALGSLVKSEPSVSP 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
D	NP_001261830.1	SOX-TCF_HMG-box	141..212	CDD:238684	59/70 (84%)
sox1	NP_001074465.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..38		7/38 (18%)
		SOX-TCF_HMG-box	36..107	CDD:238684	59/70 (84%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	197..249		12/53 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	320..343		4/7 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10270
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010