DRSC/TRiP Functional Genomics Resources

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Protein Alignment D and SOX17

DIOPT Version :9

Sequence 1:NP_001261830.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens


Alignment Length:326 Identity:104/326 - (31%)
Similarity:146/326 - (44%) Gaps:80/326 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SPNSSIGSAGSLGSQSSLGSNGSGLN--------------SSSGHQSAGMHSLATSPGQ---EGH 141
            ||::...|.....:||:|.:..:||.              ...|...|...:.|.:.|:   |..
Human     3 SPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESR 67

  Fly   142 IKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEH 206
            |:|||||||||::.:|:::|:.||.:||:|:||.||..||.|..:|||||::||:|||..||::|
Human    68 IRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDH 132

  Fly   207 PDYKYRPRRKPK----------------NPLTA--GPQGGLQMQAGGMG----QQKLGAGPGAGA 249
            |:|||||||:.:                .|..|  ||:|| ::...|:|    :|...|||    
Human   133 PNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG-RVAMDGLGLQFPEQGFPAGP---- 192

  Fly   250 GGYNPFHQLPPYFAPSHHLD---------QGYPVPY-----FGGFDP-LALSKLHQSQAAAAAAV 299
                |.  |||:.. .|:.|         .|||:|.     ..|.|| .|...........||..
Human   193 ----PL--LPPHMG-GHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAPMPGDCPAAGT 250

  Fly   300 NNQGQQQGQA-PPQLPPTSLSSFYSGIYSGISAPSLYAAHSA-----NAAGLYPSSSTSSPGSSP 358
            .:..|....| ||:.|...:........:|.|.|.|.|..||     .|.|        |||:..
Human   251 YSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHVYYGAMG--------SPGAGG 307

  Fly   359 G 359
            |
Human   308 G 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNP_001261830.1 SOX-TCF_HMG-box 141..212 CDD:238684 40/70 (57%)
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66 4/29 (14%)
SOX-TCF_HMG-box 67..138 CDD:238684 40/70 (57%)
Sox_C_TAD 201..412 CDD:288887 30/116 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.940

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