Protein Alignment D and sox5

DIOPT Version :9

• Sequence 1: NP_001261830.1
• Gene: D / 39570
• FlyBaseID: FBgn0000411
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_021330769.1
• Gene: sox5 / 567413
• ZFINID: ZDB-GENE-000607-13
• Length: 763
• Species: Danio rerio
• Alignment Length: 443
• Identity: 99/443 - (22%)
• Similarity: 144/443 - (32%)
• Gaps: 179/443 - (40%)

  Fly    14 LGQAQGLEDYAPQ-SQLQLSPG----------------------------------MDMDIKRVL 43
            ||..|..:.||.| :.:|:|||                                  .|...:.:.
Zfish   329 LGPLQLQQLYAAQLAAMQVSPGAKHSTVPQANLATGTLSPTSGQSEKNRSTPPPKPKDEGAQPLN 393

  Fly    44 HYSQSLAAMGGSPNGPAGQGVNGSSGMGHHMSSHMTPHHMHQAVSAQQTLSPNSSIGSAGSLGSQ 108
            ..|:..|:...||..||...|.... :|.....|..|..:....|...::...|||.|||.|...
Zfish   394 LSSKPKASESKSPTSPASPQVPALK-LGPGSLKHSAPSSIGGPPSRLSSIDLLSSITSAGYLNDH 457

  Fly   109 SSL--------------------------GSNGSGLNSSSGH-----QSAGMHSLAT-------- 134
            .::                          ..|...||:....     :.|.:.||:.
Zfish   458 EAVTKAFQEARKMKEQLKREEQVLDAKVAAVNSLSLNNGRSEKVRFMEKAALESLSQQLKQSEES 522

  Fly   135 -----------------SP---------------GQEGHIKRPMNAFMVWSRLQRRQIAKDNPKM 167
                             ||               ..|.||||||||||||::.:||:|.:..|.|
Zfish   523 KFTHAMMDFGISGDSDGSPSVSDSRIFREARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDM 587

  Fly   168 HNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRK---------------- 216
            |||.|||.||:.||.:...||:|:.:|..||...|::::|||||:||.|
Zfish   588 HNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYK 652

  Fly   217 ---------PKNPLTAGPQGGLQMQAGGMGQQKLGAGPGAGAGGYNPFHQLPPYFAPSHHLDQGY 272
                     .:...|.|.|..|.:.:.|:      ..|||.:....|..|:     ||.|
Zfish   653 AIMRNRRQEMRQYFTVGQQAQLPLSSAGV------VYPGALSMAGMPSPQM-----PSEH----- 701

  Fly   273 PVPYFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGI 325
                                           .....:|..:||||.:|::..:
Zfish   702 -------------------------------SSMSSSPEPVPPTSQASYFKEV 723

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
D	NP_001261830.1	SOX-TCF_HMG-box	141..212	CDD:238684	38/70 (54%)
sox5	XP_021330769.1	SSL_OB	332..>415	CDD:332684	15/82 (18%)
		SOX-TCF_HMG-box	561..632	CDD:238684	38/70 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000