DRSC/TRiP Functional Genomics Resources

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Protein Alignment D and sox7

DIOPT Version :10

Sequence 1:NP_524066.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001016326.1 Gene:sox7 / 549080 XenbaseID:XB-GENE-488067 Length:362 Species:Xenopus tropicalis


Alignment Length:310 Identity:81/310 - (26%)
Similarity:125/310 - (40%) Gaps:81/310 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 HSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDE 194
            |......|.|..|:|||||||||::.:|:::|..||.:||:|:||.||..||.|:.::|||:::|
 Frog    30 HRSPREKGSETRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEE 94

  Fly   195 AKRLRALHMKEHPDYKYRPRRKPK-----------------------NPLTAGPQGGLQMQAGGM 236
            |:|||..||:::|:||||||||.:                       .|.|.|.:..::      
 Frog    95 AERLRVQHMQDYPNYKYRPRRKKQIKRICKRVDTGFLLSSLSRDQNSVPDTRGCRTAVE------ 153

  Fly   237 GQQKLGAGPGAGAGGYNPFHQ-----------------LPPYFAPSHHLDQG---YPVP------ 275
             :::.|..||:.......:.:                 .||..:|...:||.   |..|      
 Frog   154 -KEENGGYPGSALPDMRHYRETPSNGSKHDQTYPYGLPTPPEMSPLEAIDQDQSFYSTPCSEDCH 217

  Fly   276 --------YFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISAP 332
                    .:....|:..|.|.|      ..:...|.......|..||...||.|..|:..    
 Frog   218 PHINGAVYEYSSRSPILCSHLSQ------VPIPQTGSSMIPPVPNCPPAYYSSTYHSIHHN---- 272

  Fly   333 SLYAAHSANAA-----GLYPSSSTSSPGSSPGTITPNGMDGSMDSALRRP 377
              |.||....:     ..|.:....|.....|.:..|..|..::::|..|
 Frog   273 --YHAHLGQLSPPPEHPHYDAIDQISQAELLGDMDRNEFDQYLNTSLHDP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNP_524066.1 HMG-box_SoxB 140..219 CDD:438790 43/101 (43%)
sox7NP_001016326.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..41 3/10 (30%)
HMG-box_SoxF_SOX7 31..118 CDD:438849 45/86 (52%)
Sox17_18_mid 171..218 CDD:463454 7/46 (15%)

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