Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001002483.1 | Gene: | sox1a / 436756 | ZFINID: | ZDB-GENE-040718-186 | Length: | 336 | Species: | Danio rerio |
Alignment Length: | 354 | Identity: | 125/354 - (35%) |
---|---|---|---|
Similarity: | 156/354 - (44%) | Gaps: | 126/354 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 SLGSQSSLGSNGSGLNSSSGHQSAGMHSLATSPGQEG----------HIKRPMNAFMVWSRLQRR 158
Fly 159 QIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK----- 218
Fly 219 ------NPLTAGPQGGLQMQAGGMGQQ---KLGAGPGAGAGGYNPFHQLPPYFAPSHHLDQGYPV 274
Fly 275 PYFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQAPP---------------------------- 311
Fly 312 QLPPTSLSSFY-----SGIYSGISAPSLYAAHSANAA-----------------GLYPSSSTSSP 354
Fly 355 GSSPGTI-------TPNGMDG--SMDSAL 374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 58/70 (83%) |
sox1a | NP_001002483.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..39 | 10/49 (20%) | |
SOX-TCF_HMG-box | 36..107 | CDD:238684 | 58/70 (83%) | ||
SOXp | 106..>194 | CDD:289133 | 31/111 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 193..216 | 1/22 (5%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.870 |