Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998869.1 | Gene: | sox2 / 407873 | XenbaseID: | XB-GENE-484553 | Length: | 311 | Species: | Xenopus tropicalis |
Alignment Length: | 314 | Identity: | 115/314 - (36%) |
---|---|---|---|
Similarity: | 148/314 - (47%) | Gaps: | 85/314 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 108 QSSLGSNGSGLNSSSGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEI 172
Fly 173 SKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK------------------- 218
Fly 219 NPLTAGPQGGLQMQAG-------------------GMGQQKLGAGPGAGAGGYNPFHQLPPYFAP 264
Fly 265 SHHLD--------QGYPVPYFGGFDPLALSKLHQSQAAAAAAVNNQG----QQQGQAPPQLPPTS 317
Fly 318 ----------LSSFYSGIYSGISAPSLYAAHSANAAGLYPSSS---TSSPGSSP 358 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 61/70 (87%) |
sox2 | NP_998869.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | 10/36 (28%) | |
SOX-TCF_HMG-box | 36..107 | CDD:238684 | 61/73 (84%) | ||
SOXp | 106..194 | CDD:372055 | 24/94 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 232..259 | 4/26 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |