Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_957195.1 | Gene: | sox4b / 393875 | ZFINID: | ZDB-GENE-040426-1274 | Length: | 342 | Species: | Danio rerio |
Alignment Length: | 318 | Identity: | 107/318 - (33%) |
---|---|---|---|
Similarity: | 148/318 - (46%) | Gaps: | 72/318 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 105 LGSQSSLGSNGSGLNSSSGHQSAGMHSLATSPGQ----------------EGHIKRPMNAFMVWS 153
Fly 154 RLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 218
Fly 219 NPLTAGPQGGLQMQAGGMGQQKLGAGPGAGAGGYNPFHQLPPYFAPSHHLDQGYPVPYFGGFDPL 283
Fly 284 ALSKLH---QSQAAAAAAVNNQGQQQGQAPPQL-------PPTSLSSFYSGI--------YSGIS 330
Fly 331 ----APSLYAAHSANAAGLYPSS----------STSSPG---SSPGTITPNGMDGSMD 371 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 46/70 (66%) |
sox4b | NP_957195.1 | SOX-TCF_HMG-box | 54..125 | CDD:238684 | 46/70 (66%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |