Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998283.1 | Gene: | sox2 / 378723 | ZFINID: | ZDB-GENE-030909-1 | Length: | 315 | Species: | Danio rerio |
Alignment Length: | 273 | Identity: | 118/273 - (43%) |
---|---|---|---|
Similarity: | 144/273 - (52%) | Gaps: | 60/273 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 SNGSGLNSSSGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLG 177
Fly 178 AEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGP---QGGLQMQAGGMGQQ 239
Fly 240 KLGAGPGAGAG---GYNPFHQLPPYFAPSHHLD-------------QGYPV-PYFGGFDPLALSK 287
Fly 288 LHQSQAAAA---AAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISAPSLYAAHSANAAGLYPSS 349
Fly 350 STSSPGSSPGTIT 362 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 63/70 (90%) |
sox2 | NP_998283.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..41 | 9/31 (29%) | |
SOX-TCF_HMG-box | 37..108 | CDD:238684 | 63/73 (86%) | ||
SOXp | 107..197 | CDD:289133 | 29/99 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 235..263 | 7/19 (37%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 296..315 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.870 |