Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019952.1 | Gene: | Sox18 / 311723 | RGDID: | 1311718 | Length: | 377 | Species: | Rattus norvegicus |
Alignment Length: | 305 | Identity: | 96/305 - (31%) |
---|---|---|---|
Similarity: | 137/305 - (44%) | Gaps: | 62/305 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 95 PNSSIGSAGSLGSQSSLGSNGSGLNSSSGHQSAGMHSLATSP------GQEG------------H 141
Fly 142 IKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEH 206
Fly 207 PDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGP-GAGAGGYNPFHQLPPYFAPSHHLDQ 270
Fly 271 GYPVPYFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQA---PPQLPP--TSLSSFY-------- 322
Fly 323 ---SGIYSGISAPSLYAA-HSANAAGLYPSSSTSSPGSSPGTITP 363 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 38/70 (54%) |
Sox18 | NP_001019952.1 | SOX-TCF_HMG-box | 78..149 | CDD:238684 | 38/70 (54%) |
Sox17_18_mid | 191..239 | CDD:403331 | 17/70 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |