DRSC/TRiP Functional Genomics Resources

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Protein Alignment D and tcf7l1b

DIOPT Version :9

Sequence 1:NP_001261830.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571371.2 Gene:tcf7l1b / 30556 ZFINID:ZDB-GENE-991110-10 Length:550 Species:Danio rerio


Alignment Length:387 Identity:95/387 - (24%)
Similarity:143/387 - (36%) Gaps:109/387 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LEDYAPQSQLQLSPGMDMDIKRVL--------HYSQSLAAMGGSPNGPA-GQGVNGSSGMGHHMS 75
            |..|.|     ||||....|...|        .:...:.|.|.....|| ....:.||.:....|
Zfish   211 LSPYYP-----LSPGAVGQIPHPLGWLVPQQGQHMYPITAGGFRHPYPALAMNASMSSLVSSRFS 270

  Fly    76 SHMTPHHMHQAVSAQQTLSPNSSIGSAGSLGSQSSLGSNGSGLNSSSGHQSAGMHSLATSPG--- 137
            .|:.|||.|   ...||..|:.:|.|  .:..|...|.....:|:.             |||   
Zfish   271 PHLVPHHPH---GLHQTGIPHPAIVS--PVIKQEPNGELSPPVNTK-------------SPGPNK 317

  Fly   138 ----QEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRL 198
                ::.|||:|:||||::.:..|.::..:.....::.|::.||..|..|:..|:..:.:.|::.
Zfish   318 KDEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKE 382

  Fly   199 RALHMKEHP------DYKYRPRRKPKNPLTAGPQGGLQMQAGG-----MGQQKLGAGPGAGAGGY 252
            |.||.:.:|      :|..|.:||..|...:.|: ...|::..     :.|:|:...||:..|..
Zfish   383 RQLHSQLYPGWSARDNYGKRKKRKRDNKTDSTPE-DFSMRSKKPCVQYLPQEKMIDSPGSSHGSM 446

  Fly   253 NPFHQLPPYFAPSHHLDQGYPVPYFGGFDPLALSKLHQSQAAAAAAVNNQGQQQGQAPPQLPPTS 317
                           ||           .|...|....|.||.||..:.|.|          |.|
Zfish   447 ---------------LD-----------SPATPSAALASPAAPAATHSEQAQ----------PLS 475

  Fly   318 LSSFYSGIYSGISAPSLYAAHSANAAGLYPSSSTSSPGSSPGTITPNGMDGSMDSALRRPVP 379
            |:          :.|..:...|...    ||||:||..||.|..||        ..|.||:|
Zfish   476 LT----------TKPERFPLLSKPP----PSSSSSSSSSSSGLPTP--------PLLSRPLP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNP_001261830.1 SOX-TCF_HMG-box 141..212 CDD:238684 21/76 (28%)
tcf7l1bNP_571371.2 CTNNB1_binding 1..231 CDD:285538 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..326 6/40 (15%)
SOX-TCF_HMG-box 325..396 CDD:238684 20/70 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I5417
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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