Sequence 1: | NP_001261830.1 | Gene: | D / 39570 | FlyBaseID: | FBgn0000411 | Length: | 382 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001001811.2 | Gene: | sox3 / 30529 | ZFINID: | ZDB-GENE-980526-333 | Length: | 300 | Species: | Danio rerio |
Alignment Length: | 301 | Identity: | 116/301 - (38%) |
---|---|---|---|
Similarity: | 146/301 - (48%) | Gaps: | 75/301 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 108 QSSLGSNGSGLNSSSGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEI 172
Fly 173 SKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGP---QGGLQMQAG 234
Fly 235 GMGQQKLGAGPGAGAGGYNPFHQLPPYFAPSHHLDQGYPVPY--FGGFDPLALSKLHQSQAA--A 295
Fly 296 AAAVNNQGQQQ----GQAPPQLPPTSLSSFYSGIYSGISAPS-LYAAHSANAAGLYPSSST--SS 353
Fly 354 PGSSPGTIT-------------------PNGMDGSMDSALR 375 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
D | NP_001261830.1 | SOX-TCF_HMG-box | 141..212 | CDD:238684 | 58/70 (83%) |
sox3 | NP_001001811.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | 8/33 (24%) | |
SOX-TCF_HMG-box | 34..105 | CDD:238684 | 58/70 (83%) | ||
SOXp | 104..182 | CDD:289133 | 27/105 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.870 |