Protein Alignment D and Sox13

DIOPT Version :9

• Sequence 1: NP_001261830.1
• Gene: D / 39570
• FlyBaseID: FBgn0000411
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_006249824.1
• Gene: Sox13 / 289026
• RGDID: 1309674
• Length: 613
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 82/278 - (29%)
• Similarity: 111/278 - (39%)
• Gaps: 69/278 - (24%)

  Fly    56 PNGPAGQGVNGSSGMGHHMSSHMTPHHMHQAVSAQQTLSPNSSIGSAGS--------LGSQSSLG 112
            ||..:...:..:| .|...|||..|      ....|:..||..:|..|.        ..::..|.
  Rat   297 PNTSSSPSLKMNS-CGPRPSSHGAP------TRDLQSSPPNLPLGFLGEGDAVTKAIQDARQLLH 354

  Fly   113 SNGSGL-NSSSGHQSAGMHSLATSPGQE-------------------------------GHIKRP 145
            |:...| ||.|......:.||.:||.:|                               .|||||
  Rat   355 SHSGALENSPSAPFRKDLISLDSSPAKERLEENCVHPLEEAMLGCDVDGSRHFSESRNSSHIKRP 419

  Fly   146 MNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYK 210
            |||||||::.:||:|.:..|.||||.|||.||:.||.:...||:|:.:|..||...|::::||||
  Rat   420 MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYK 484

  Fly   211 YRPRRKPKNP-------LTAGPQGGLQMQAGGMGQQKLGAGPGAG------------AGGYNPFH 256
            |:||  ||..       |..|....|........:|.....|.||            |.|.....
  Rat   485 YKPR--PKRTCVVEGRRLRVGEYKALMRTRRQGARQSYAIPPQAGQAQVSSDILFPRAAGMPLAR 547

  Fly   257 QLPPYFAPSHHLDQGYPV 274
            .|..::.| ..||...||
  Rat   548 PLVEHYDP-QGLDPNMPV 564

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
D	NP_001261830.1	SOX-TCF_HMG-box	141..212	CDD:238684	38/70 (54%)
Sox13	XP_006249824.1	Herpes_UL46	<251..>419	CDD:355696	27/128 (21%)
		SOX-TCF_HMG-box	415..486	CDD:238684	38/70 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810