DRSC/TRiP Functional Genomics Resources

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Protein Alignment D and Meiosin

DIOPT Version :9

Sequence 1:NP_001261830.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001357740.1 Gene:Meiosin / 243866 MGIID:3647482 Length:589 Species:Mus musculus


Alignment Length:208 Identity:44/208 - (21%)
Similarity:70/208 - (33%) Gaps:85/208 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SPNGPAGQGVNGSSGMGHHMSSHMTPHHMHQAVSAQQ---TLSPN----SSIGSAG--------- 103
            |..||.|                  |.:...:||...   :||.|    |:.||:.         
Mouse   352 SSEGPTG------------------PPNFQSSVSLDHCYLSLSENVKVLSNCGSSSESTDTESLW 398

  Fly   104 ------------------SLGSQSSL-GSNGSGLNSSSGH----------QSAGM---------- 129
                              ||...|.| .:|..||.:||..          ||:|:          
Mouse   399 GQEEVRGVATYPRRTGVFSLAQPSVLQQANPEGLQTSSDEDRDYTWTPTGQSSGLPVASKKIKKV 463

  Fly   130 ----------HSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLA 184
                      .|....|||..  |:.:|.|:::.|:.|:|..:..|...::..:|.|...|:.:.
Mouse   464 QASQGPVKPKDSRKACPGQVK--KKCVNGFIMFCRMNRKQYIRACPGTASTAATKDLAQLWRGMT 526

  Fly   185 ESEKRPFIDEAKR 197
            ..||:|:..:|:|
Mouse   527 LEEKKPYCTKARR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNP_001261830.1 SOX-TCF_HMG-box 141..212 CDD:238684 15/57 (26%)
MeiosinNP_001357740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 14..27
bHLH_SF 24..73 CDD:412148
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 28..68
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..191
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..363 5/28 (18%)
NHP6B 416..>539 CDD:227935 30/124 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..457 10/34 (29%)
HMG-box 484..539 CDD:238037 14/56 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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