DRSC/TRiP Functional Genomics Resources

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Protein Alignment D and Sox15

DIOPT Version :10

Sequence 1:NP_524066.1 Gene:D / 39570 FlyBaseID:FBgn0000411 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_033261.1 Gene:Sox15 / 20670 MGIID:98363 Length:231 Species:Mus musculus


Alignment Length:306 Identity:60/306 - (19%)
Similarity:112/306 - (36%) Gaps:83/306 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 AIAKMKKFDLVISFG----------EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128
            ||...|....|.|.|          ||||::.:       .:.|....|| |.|...::.|.:.:
Mouse  1121 AILSAKSSSSVSSLGADGEFLHELEEKMEVVRI-------QVQIQETLRR-QFSQHPSVQGAITQ 1177

  Fly   129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAV 190
            |  ...::.:..|...|....|:||....:   :......|.:    |||.|:|   ..:.:::|
Mouse  1178 L--DSELMDITKLYGEFADHFRLSECKLAI---IHCAGHSDPI----LVHSLWQEIIEKELNDSV 1233

  Fly   191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV--VIYS--------- 244
            .:.....::.....||:.|.|..|..:....|..:..| :.|..::..||  |.::         
Mouse  1234 VMSPSDRMRAVSLKLVSLGKVYAGTPRYFPLDFLVKFL-EQEVCRLNWDVGFVTFTMQEIGVQLP 1297

  Fly   245 ---TVIDSLCKYR-----------HVDDALNLFTE--MDNKGIRPDVFTY------SSLISCLCN 287
               .|.|.|.|.|           |:.:.:::...  :|:....|   ||      ::.:..:|.
Mouse  1298 RLLEVYDQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVDDPSRVP---TYDRRRFTNACLDNICG 1359

  Fly   288 YGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
            |            ::| :.::||....:.:.:..:.:.||   |||
Mouse  1360 Y------------LVELQSLSPNAALQDIIRNFKSLQAKL---EKL 1390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNP_524066.1 HMG-box_SoxB 140..219 CDD:438790 17/81 (21%)
Sox15NP_033261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
Required to promote HAND1 transcriptional activator activity. /evidence=ECO:0000269|PubMed:16759287 1..45
HMG-box_SoxA_SoxB_SoxG 46..121 CDD:438837
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..136
Interaction with FHL3. /evidence=ECO:0000269|PubMed:17363903 136..181
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..231
Blue background indicates that the domain is not in the aligned region.

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