Protein Alignment D and Sox5

DIOPT Version :9

• Sequence 1: NP_001261830.1
• Gene: D / 39570
• FlyBaseID: FBgn0000411
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_006237666.1
• Gene: Sox5 / 140587
• RGDID: 620471
• Length: 764
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 78/260 - (30%)
• Similarity: 109/260 - (41%)
• Gaps: 87/260 - (33%)

  Fly    98 SIGSAGSLGSQSSLGSNGSGLNSSSGHQSAGMHSLATSPGQEGHIKRPMNAFMVWSRLQRRQIAK 162
            |.||||...|:....|.|.|.|                   |.||||||||||||::.:||:|.:
  Rat   532 SDGSAGVSESRIYRESRGRGSN-------------------EPHIKRPMNAFMVWAKDERRKILQ 577

  Fly   163 DNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQG 227
            ..|.||||.|||.||:.||.:...||:|:.:|..||...|::::|||||:||  ||.....   .
  Rat   578 AFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPR--PKRTCLV---D 637

  Fly   228 GLQMQAGGMGQQKLGAGPGAGAGGYNPFHQLPPYFAPSHHLDQGYPVPYFGGFDPLALSKLHQSQ 292
            |.:::   :|:.|        |...|...::..||
  Rat   638 GKKLR---IGEYK--------AIMRNRRQEMRQYF------------------------------ 661

  Fly   293 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSG--IYSGISAPSLYAAHSANAAGLYPSSSTSSPG 355
                    |.|||     .|:|..:....|.|  ..:|:.:|.|.:.||:       .||:..||
  Rat   662 --------NVGQQ-----AQIPIATAGVVYPGAIAMAGMPSPHLPSEHSS-------VSSSPEPG 706

  Fly   356  355
              Rat   707  706

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
D	NP_001261830.1	SOX-TCF_HMG-box	141..212	CDD:238684	38/70 (54%)
Sox5	XP_006237666.1	SOX-TCF_HMG-box	556..627	CDD:238684	38/70 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900