DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21b and SOX9

DIOPT Version :10

Sequence 1:NP_001261829.1 Gene:Sox21b / 39569 FlyBaseID:FBgn0042630 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_000337.1 Gene:SOX9 / 6662 HGNCID:11204 Length:509 Species:Homo sapiens


Alignment Length:386 Identity:109/386 - (28%)
Similarity:156/386 - (40%) Gaps:112/386 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAM 307
            :|:.|:||||||||||::..|||:|...|.:||:|:||.||..|:||.|.|||||::||:|||..
Human   100 KNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164

  Fly   308 HMKEHPDYKYRPRRKP------------------------KALRRDGYPYPMPYPSVPVEALRAG 348
            |.|:||||||:|||:.                        |||:.|.     |:.|       :|
Human   165 HKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQADS-----PHSS-------SG 217

  Fly   349 ITPGYFAPGPTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALER-------------------- 393
            ::..: :||.     |.|...|..:.|||.:..:  |..|..|:|                    
Human   218 MSEVH-SPGE-----HSGQSQGPPTPPTTPKTDV--QPGKADLKREGRPLPEGGRQPPIDFRDVD 274

  Fly   394 -----SSYLSN--SSQASAYSAYLDPS----------VLTKAYFDSKMYQDRAANYAFDISKIYG 441
                 |..:||  :...:.:..||.|:          .:|  |..|......||..| ....::.
Human   275 IGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVT--YTGSYGISSTAATPA-SAGHVWM 336

  Fly   442 AQQHAAAHHQQQQQQ----------------QQ-----QQQQQQQQLLLSGGGGSGGGGSASSHN 485
            ::|.|.....||..|                ||     ||.|......||...|........:..
Human   337 SKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQ 401

  Fly   486 NNSSSGLDDRDATPQLEAVE--SKPHLHSPSDVGLDYAQY----AQQYGGQLAAAAGGAVG 540
            .:.|...:.:..:||..|..  :.|| :|||...:..:||    .|......:.|||...|
Human   402 LSPSHYSEQQQHSPQQIAYSPFNLPH-YSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21bNP_001261829.1 HMG-box_SoxB 246..325 CDD:438790 48/102 (47%)
SOX9NP_000337.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67
Sox_N 22..94 CDD:463586
Dimerization (DIM). /evidence=ECO:0000305|PubMed:31194875 63..103 1/2 (50%)
PQA. /evidence=ECO:0000305|PubMed:31194875 63..103 1/2 (50%)
HMG-box_SoxE 104..178 CDD:438840 46/73 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..273 33/132 (25%)
Transactivation domain (TAM). /evidence=ECO:0000269|PubMed:31194875 224..307 18/89 (20%)
9aaTAD 1. /evidence=ECO:0000269|PubMed:31194875 275..284 1/8 (13%)
9aaTAD 2. /evidence=ECO:0000269|PubMed:31194875 290..298 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..415 14/84 (17%)
Transactivation domain (TAC). /evidence=ECO:0000269|PubMed:8640233 394..509 16/69 (23%)
9aaTAD 3. /evidence=ECO:0000269|PubMed:34342803 460..468 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..509
Blue background indicates that the domain is not in the aligned region.

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