Protein Alignment Sox21b and sox12

DIOPT Version :10

• Sequence 1: NP_001261829.1
• Gene: Sox21b / 39569
• FlyBaseID: FBgn0042630
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: NP_001025449.3
• Gene: sox12 / 562381
• ZFINID: ZDB-GENE-040724-33
• Length: 369
• Species: Danio rerio
• Alignment Length: 327
• Identity: 99/327 - (30%)
• Similarity: 139/327 - (42%)
• Gaps: 74/327 - (22%)

  Fly   201 LHHNSQASPISNLHQNMGSLMNSGSSASDVFFSLMIQNTTK-----RQNEE---------HIKRP 251
            |:.:.:...:........|:|:|.|| .:||..|..::..:     ..|::         |||||
Zfish     7 LNRSQRCIMVQQRTHKYSSVMDSNSS-REVFVGLAAEDDAEVFGHVPSNKDPNWCKTPTGHIKRP 70

  Fly   252 MNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYK 316
            ||||||||:::||||.:..|.|||:|||||||..||||.:.||.|||.||:|||..||.::||||
Zfish    71 MNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKHMADYPDYK 135

  Fly   317 YRPRRKPKALR--RDGYPYPMPYPSVPVEALRAGITPGYFAPGPTAAAYHLGSHLGQTSTPTTTQ 379
            ||||:|.|...  :.|...||. .|.|:....:|:                 |..|....|.:::
Zfish   136 YRPRKKSKGSTPVKLGEKLPMK-SSKPLPGRSSGL-----------------SCKGLKIKPASSK 182

  Fly   380 ATLSGQMDKFALERSSYLSNSSQASAYSAYLDPSVLTKAYFDSKMYQDRAANYAFDISKIYGAQQ 444
            ..::...:|:    .||..:.|........|:..|..:        .||            ....
Zfish   183 HKMNFSSNKY----KSYSESMSDDDTMDVNLESPVTQQ--------DDR------------NTSS 223

  Fly   445 HAAAHHQQQQQQQQQQ------------QQQQQQLLLSGGGGSGGGGSASSHNNNSSSGLDDRDA 497
            |...|.|...|.:.||            |....|.|.|.........|.:|....|:||   |.:
Zfish   224 HFVLHQQATVQSEDQQPIPELRVKVPISQTSSIQSLSSDSECQAFPESTTSEPRGSTSG---RSS 285

  Fly   498 TP 499
            ||
Zfish   286 TP 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21b	NP_001261829.1	HMG-box_SoxB	246..325	CDD:438790	53/87 (61%)
sox12	NP_001025449.3	None