DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21b and SOX6

DIOPT Version :9

Sequence 1:NP_001261829.1 Gene:Sox21b / 39569 FlyBaseID:FBgn0042630 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001139291.2 Gene:SOX6 / 55553 HGNCID:16421 Length:828 Species:Homo sapiens


Alignment Length:606 Identity:124/606 - (20%)
Similarity:193/606 - (31%) Gaps:209/606 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSLAHPLQTHLGSGGGTHHLGQLAAAVHQQQQQQQQSDQGLGHSHHLHGQQLSLNHQHH------ 72
            |..||..|..|.:........|:..|..||:|..:|..|.|...|.::..|..:..|.|      
Human   205 LLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMI 269

  Fly    73 --HPHQ---------------------------------------------SP-QHQQQHQHHPC 89
              .||.                                             || |.|:.|..||.
Human   270 PIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQ 334

  Fly    90 SSNSSNG-SPNGSTGLGLHPHSALHLAHHHSQLHQHH----------PAGQQQQHSQPPVSSSST 143
            .:....| |......|....|...| :::|.|:.|.:          |..:.....|||.::.:.
Human   335 INQRLKGLSDRFGRNLDTFEHGGGH-SYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTV 398

  Fly   144 S-------------------------------------------------HHSQSQALSHQTHSN 159
            |                                                 ..|::..::....|:
Human   399 SPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSS 463

  Fly   160 GSSQLGGGSASGAGSVAGGAANSHHSAPASSSVMAAAAAAHLHH---------------NSQASP 209
            ..|.:||....|:......:.||........:||.|...|....               :.:.|.
Human   464 IPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSS 528

  Fly   210 ISNL-------------HQNMG-----------------------------SLMNSGSSASDVFF 232
            |:|:             .:|:|                             ..||..::....::
Human   529 INNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYY 593

  Fly   233 SLMIQNTT------------KRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAE 285
            .......|            :..:|.||||||||||||::.:||||.|..|.||||.|||.||:.
Human   594 CWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 658

  Fly   286 WKLLTEEEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKALRRDGYPYPM--------- 335
            ||.::.:||:|:.:|..||..:|::::|:|||:||.|      .|.||...|...|         
Human   659 WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQ 723

  Fly   336 -----PYPSVPVEALRAGITPGYFAPGPTAAAYHLGSHLGQTST---PT--TTQATLSGQMDKFA 390
                 ..|.:|:......:.||......|..:..:.|....||.   |:  ..|:|...:.|..:
Human   724 FFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGS 788

  Fly   391 LERSSYLSNSSQASAYSAYLD 411
            |..:..::...:...|..|.|
Human   789 LAGNEMINGEDEMEMYDDYED 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21bNP_001261829.1 SOX-TCF_HMG-box 247..318 CDD:238684 39/70 (56%)
SOX6NP_001139291.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..470 8/89 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 753..828 11/57 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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