DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21b and MEIOSIN

DIOPT Version :9

Sequence 1:NP_001261829.1 Gene:Sox21b / 39569 FlyBaseID:FBgn0042630 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_011525873.1 Gene:MEIOSIN / 388553 HGNCID:44318 Length:644 Species:Homo sapiens


Alignment Length:332 Identity:64/332 - (19%)
Similarity:110/332 - (33%) Gaps:120/332 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NSSNGSPN----------GSTG-----LGLHP-----------------------------HSAL 112
            ||..|||.          ..||     |||.|                             ...|
Human   340 NSPQGSPLFLGPPQIDVWSGTGHPSEILGLSPSLFSSPGKLLPDEILEDDMEYLTQAAFFEEVCL 404

  Fly   113 HLAHHHSQLHQHHPAGQQQQHSQPPVSSSSTSHHSQSQALSHQTHSNGSSQLGGGSASGAGSVAG 177
            .|....|...|..|..:......|.....|.|.|..|.:|.|...|     |.|.|         
Human   405 DLESSPSAYTQEAPQEKDTASKAPKDPPESHSLHRSSVSLDHCYLS-----LSGNS--------- 455

  Fly   178 GAANSHHSAPASSSVMAAAAAAHLHHNSQASPISNLHQNM--GSLMNSGSSASDVFFSLMIQNTT 240
                   .||:|||  ::::::....:|.:.|:....::|  ..:...|||..|       ::||
Human   456 -------KAPSSSS--SSSSSSSSSEDSDSEPLWKQREDMQANPVGTPGSSEED-------EDTT 504

  Fly   241 --------------KRQNEEHI--------------------KRPMNAFMVWSRLQRRKIAQDNP 271
                          |:..:..:                    |:.:|.|:::.|:.|::..:..|
Human   505 WTPTRLASPLLAAEKKATKGQVARAPVKPKEKKKGPCPPQMKKKCVNGFIMFCRMNRKQYIRSCP 569

  Fly   272 KMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMK---------EHPDYKYRPRRKPKALR 327
            ...::..:|.|...|:::|::|:||:..:|:|....|.:         |..|:: .|:...:.|.
Human   570 GTASTAATKELAQLWRVMTQQERRPYCTKARRFSRQHNRIVKQDGSSSEAEDWE-TPKPFYQLLA 633

  Fly   328 RDGYPYP 334
            ....|.|
Human   634 EKALPLP 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21bNP_001261829.1 SOX-TCF_HMG-box 247..318 CDD:238684 18/99 (18%)
MEIOSINXP_011525873.1 HMG-box 547..606 CDD:294061 15/58 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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