Protein Alignment Sox21b and Sox13

DIOPT Version :9

• Sequence 1: NP_001261829.1
• Gene: Sox21b / 39569
• FlyBaseID: FBgn0042630
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: XP_006249824.1
• Gene: Sox13 / 289026
• RGDID: 1309674
• Length: 613
• Species: Rattus norvegicus
• Alignment Length: 403
• Identity: 109/403 - (27%)
• Similarity: 162/403 - (40%)
• Gaps: 101/403 - (25%)

  Fly    30 THHLGQ--LAAAVHQQQQQQ-----QQSDQGLGHSHHLHGQQLSLN------HQHHHPH-QSPQH 80
            |.|..|  :||.:.::||||     ||.:|.......|..||..:|      .|.:.|: ..|..
  Rat   161 TAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAF 225

  Fly    81 QQQHQHHPCSSNSSNGSPNGSTGLGLHPHSALHLAHHHSQLHQ-------------HHPAGQQQQ 132
            ...||..|.       :|:....|.:.|.....:.:....||.             |||.
  Rat   226 PSSHQPLPV-------TPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKRPGVATHHPL----- 278

  Fly   133 HSQPPVSSSSTSHHSQSQALSHQTHSNGSSQLGGGSASGAGSVAGGAANSHHSAP---------- 187
             .:||...:.|:    ...:|...:::.|..|...|.....|..|.......|:|
  Rat   279 -QEPPQPLNLTA----KPKVSELPNTSSSPSLKMNSCGPRPSSHGAPTRDLQSSPPNLPLGFLGE 338

  Fly   188 ---ASSSVMAAAAAAHLH----HNSQASPI-------------SNLHQNMGSLMNSGSSASDVFF 232
               .:.::..|....|.|    .||.::|.             ..|.:|....:.......||..
  Rat   339 GDAVTKAIQDARQLLHSHSGALENSPSAPFRKDLISLDSSPAKERLEENCVHPLEEAMLGCDVDG 403

  Fly   233 SLMIQNTTKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPF 297
            |   ::.::.:|..||||||||||||::.:||||.|..|.||||.|||.||:.||.:|.:||:|:
  Rat   404 S---RHFSESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPY 465

  Fly   298 IDEAKRLRAMHMKEHPDYKYRPRRKP--------------KAL---RRDG--YPYPMPYPSVPVE 343
            .:|..||...|::::|||||:||.|.              |||   ||.|  ..|     ::|.:
  Rat   466 YEEQARLSRQHLEKYPDYKYKPRPKRTCVVEGRRLRVGEYKALMRTRRQGARQSY-----AIPPQ 525

  Fly   344 ALRAGITPGYFAP 356
            |.:|.::.....|
  Rat   526 AGQAQVSSDILFP 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21b	NP_001261829.1	SOX-TCF_HMG-box	247..318	CDD:238684	41/70 (59%)
Sox13	XP_006249824.1	Herpes_UL46	<251..>419	CDD:355696	31/180 (17%)
		SOX-TCF_HMG-box	415..486	CDD:238684	41/70 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0527
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000028
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810