Protein Alignment Sox21b and mat3-Mc

DIOPT Version :10

• Sequence 1: NP_001261829.1
• Gene: Sox21b / 39569
• FlyBaseID: FBgn0042630
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: NP_595875.1
• Gene: mat3-Mc / 2540048
• PomBaseID: SPBC1711.02
• Length: 181
• Species: Schizosaccharomyces pombe
• Alignment Length: 131
• Identity: 36/131 - (27%)
• Similarity: 68/131 - (51%)
• Gaps: 22/131 - (16%)

  Fly   208 SPISNLHQNMGSLMNSGSSA-----SDVFFSL------------MIQNTTKRQNEEHIKRPMNAF 255
            :||  |..|..|.:..|:||     ..:.|:|            :.::||   :.|...||.|||
pombe    51 TPI--LIPNSQSYLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTT---STERTPRPPNAF 110

  Fly   256 MVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYKYRPR 320
            :::.:.:...:.:.||.::||::||.:|..|:..::|.:..:...::..:|.|.|.:|.|||:||
pombe   111 ILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGYKYQPR 175

  Fly   321 R 321
            :
pombe   176 K 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21b	NP_001261829.1	HMG-box_SoxB	246..325	CDD:438790	24/76 (32%)
mat3-Mc	NP_595875.1	HMG-box_ROX1-like	104..174	CDD:438791	21/69 (30%)