Sequence 1: | NP_001261829.1 | Gene: | Sox21b / 39569 | FlyBaseID: | FBgn0042630 | Length: | 587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036904.1 | Gene: | Sry / 25221 | RGDID: | 3759 | Length: | 169 | Species: | Rattus norvegicus |
Alignment Length: | 227 | Identity: | 83/227 - (36%) |
---|---|---|---|
Similarity: | 105/227 - (46%) | Gaps: | 69/227 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 245 EEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHM 309
Fly 310 KEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPGYFAPGPTAAAYHLGSHLGQTST 374
Fly 375 PTTTQ------ATLSGQMDKFALERSSYLSNSSQASAYSAYLDPSVLTKAYFDSKMYQDRAANYA 433
Fly 434 FDISKIYGAQQHAAAHHQQQQQQQQQQQQQQQ 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21b | NP_001261829.1 | SOX-TCF_HMG-box | 247..318 | CDD:238684 | 47/70 (67%) |
Sry | NP_036904.1 | Sufficient for interaction with KPNB1. /evidence=ECO:0000250|UniProtKB:Q05066 | 4..81 | 50/76 (66%) | |
SOX-TCF_HMG-box | 4..74 | CDD:238684 | 46/69 (67%) | ||
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 | 6..22 | 13/15 (87%) | |||
Sufficient for interaction with EP300. /evidence=ECO:0000250|UniProtKB:Q05066 | 52..84 | 15/31 (48%) | |||
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 | 75..81 | 2/5 (40%) | |||
Necessary for interaction with ZNF208 isoform KRAB-O. /evidence=ECO:0000250|UniProtKB:Q05738 | 92..144 | 14/79 (18%) | |||
Necessary for interaction with SLC9A3R2 and nuclear accumulation of SLC9A3R2. /evidence=ECO:0000250|UniProtKB:Q05738 | 94..138 | 11/71 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 144..169 | 14/24 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |