DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21b and Sox8

DIOPT Version :10

Sequence 1:NP_001261829.1 Gene:Sox21b / 39569 FlyBaseID:FBgn0042630 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_035577.1 Gene:Sox8 / 20681 MGIID:98370 Length:464 Species:Mus musculus


Alignment Length:455 Identity:129/455 - (28%)
Similarity:182/455 - (40%) Gaps:116/455 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QQHSQPPVS----SSSTSH--HSQSQALSHQTHSNGSSQLGGGSASGAGSVAGGAANSHHSA--- 186
            :..:|||.|    :||.||  .|.|.|......|.|..:.|||   |.|..| .||:....|   
Mouse     6 EARAQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGGG---GRGDTA-EAADERFPACIR 66

  Fly   187 PASSSVMAAAAAAHLHHNSQASPISNLHQNMGSLMNSGSSASDVFFSLMIQNTTKRQNEEHIKRP 251
            .|.|.|:..       ::....|:.......|:|                      :.:.|:|||
Mouse    67 DAVSQVLKG-------YDWSLVPMPVRGGGGGTL----------------------KAKPHVKRP 102

  Fly   252 MNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYK 316
            |||||||::..|||:|...|.:||:|:||.||..|:||:|.|||||::||:|||..|.|:|||||
Mouse   103 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYK 167

  Fly   317 YRPRRKP--KALRRDGYPYPMPYPSVPVEALRAGITPGYFAPGPT--------AAAYHLGSHLGQ 371
            |:|||:.  |..|.|.               .:|...|:...||.        .|.:|...|.||
Mouse   168 YQPRRRKSVKTGRSDS---------------DSGTELGHHPGGPMYKADAVLGEAHHHSDHHTGQ 217

  Fly   372 T---STPTTTQAT-----LSGQMDKFALERSSYLSNSSQASAYSAYLDPSVLTKAYFDSKMYQDR 428
            |   .||.||..|     .:|...:..||....:.:..|...:| .:|.|.|:.....:   .|.
Mouse   218 THGPPTPPTTPKTDLHQASNGSKQELRLEGRRLVDSGRQNIDFS-NVDISELSSEVISN---MDT 278

  Fly   429 AANYAFDISKIYGAQQHAAAHHQQQQQQQQQQQQQQQQLLLSGGGGSGGGGSAS----------- 482
            ...:.||  :......|:|...:..|               :...||.||.|.|           
Mouse   279 FDVHEFD--QYLPLNGHSALPTEPSQ---------------ATASGSYGGASYSHSGATGIGASP 326

  Fly   483 --SHNNNSSSGLDDRDA---TPQLEAVESKPHLHSPSDVG----LDYAQYAQQYGGQLAAAAGGA 538
              :|....|:.....:|   .||::..:..|..::....|    .||..|:.|.....||:|..|
Mouse   327 VWAHKGAPSASASPTEAGPLRPQIKTEQLSPSHYNDQSHGSPGRADYGSYSAQASVTTAASATAA 391

  Fly   539  538
            Mouse   392  391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21bNP_001261829.1 HMG-box_SoxB 246..325 CDD:438790 48/80 (60%)
Sox8NP_035577.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 19/52 (37%)
Sox_N 18..86 CDD:463586 22/78 (28%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P57073 55..97 9/70 (13%)
HMG-box_SoxE 98..172 CDD:438840 46/73 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..244 33/104 (32%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P57073 221..299 18/83 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..315 8/37 (22%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P57073 347..464 12/45 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..374 3/19 (16%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:P57073 418..426
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..464
Blue background indicates that the domain is not in the aligned region.

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