Sequence 1: | NP_001261829.1 | Gene: | Sox21b / 39569 | FlyBaseID: | FBgn0042630 | Length: | 587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033259.2 | Gene: | Sox1 / 20664 | MGIID: | 98357 | Length: | 391 | Species: | Mus musculus |
Alignment Length: | 425 | Identity: | 139/425 - (32%) |
---|---|---|---|
Similarity: | 176/425 - (41%) | Gaps: | 140/425 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 TSHHSQSQALSHQTHSNGSSQLGGGSASGAGSVAGGAANSHHSAPASSSVMAAAAAAHLHHNSQA 207
Fly 208 SPISNLHQNMGSLMNSGSSASDVFFSLMIQNTTKRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPK 272
Fly 273 MHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKA-LRRDGYPYPMP 336
Fly 337 YPSVPVEALRAGITPGYFAPGPTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNSS 401
Fly 402 QASAYSAYLDPSVLTKAYFDSKMYQDRAANYAFDISKIYGAQQHAAAHHQQQQQQQQQQQQQQQQ 466
Fly 467 LLLSGGGGSGGGGSASSHNNNSSSGLDDRDATPQLEAVESKPHLHSPS---DVG-LDYAQYAQQY 527
Fly 528 GGQLAAAAG-GAVGGGAAGAAGGSAGGGSGGATAA 561 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21b | NP_001261829.1 | SOX-TCF_HMG-box | 247..318 | CDD:238684 | 60/70 (86%) |
Sox1 | NP_033259.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..52 | 16/105 (15%) | |
SOX-TCF_HMG-box | 50..121 | CDD:238684 | 60/70 (86%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 214..249 | 11/44 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 139 | 1.000 | Domainoid score | I4760 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.870 |