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Protein Alignment Sox21b and sox-3
DIOPT Version :9
Sequence 1: | NP_001261829.1 |
Gene: | Sox21b / 39569 |
FlyBaseID: | FBgn0042630 |
Length: | 587 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_510439.1 |
Gene: | sox-3 / 185534 |
WormBaseID: | WBGene00004950 |
Length: | 212 |
Species: | Caenorhabditis elegans |
Alignment Length: | 167 |
Identity: | 86/167 - (51%) |
Similarity: | 106/167 - (63%) |
Gaps: | 33/167 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 243 QNE-EHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRA 306
||. :|:||||||||||||.||||:|||||||||||||||||||||.|:|:||||||||||||||
Worm 42 QNSLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRA 106
Fly 307 MHMKEHPDYKYRPRRKPKALRRDGYP-YPMPYPSVP----------VEALRAGITPGYFA----- 355
:|||||||||||||||||:......| ..:..|::| .::|:......|::
Worm 107 LHMKEHPDYKYRPRRKPKSSNLKQQPRLNIAMPTIPPQSLFNYSTAFDSLKTHDLSQYYSSFFQS 171
Fly 356 ---PGPTAAAYHL-------------GSHLGQTSTPT 376
.|.|.|.|:: .|.:..::|||
Worm 172 PVLSGSTYAPYNMMAAYARQAAAVAAASQVSASTTPT 208
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0527 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S1275 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000028 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10270 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R685 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
8 | 7.850 |
|
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