Sequence 1: | NP_001261829.1 | Gene: | Sox21b / 39569 | FlyBaseID: | FBgn0042630 | Length: | 587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006237666.1 | Gene: | Sox5 / 140587 | RGDID: | 620471 | Length: | 764 | Species: | Rattus norvegicus |
Alignment Length: | 351 | Identity: | 101/351 - (28%) |
---|---|---|---|
Similarity: | 143/351 - (40%) | Gaps: | 78/351 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 96 GSPNGSTGLGLHPHSALHLAHHHSQLHQHHPAGQQQQHSQP------PVSSSSTSHHSQSQALSH 154
Fly 155 QTHSNGSSQLGGGSASGAGSVAGGAAN-------SHHSAPASSSVMAAAAAAHLHHNSQA----- 207
Fly 208 -----------------SPISNLHQNMGSLMN--------------SGSS--ASDVFFSLMIQNT 239
Fly 240 TKR-QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKR 303
Fly 304 LRAMHMKEHPDYKYRPRRKP--------------KALRRDGYPYPMPYPSVPVEALRAGITPGYF 354
Fly 355 APGPTAAA----YHLGS-HLGQTSTP 375 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21b | NP_001261829.1 | SOX-TCF_HMG-box | 247..318 | CDD:238684 | 41/70 (59%) |
Sox5 | XP_006237666.1 | SOX-TCF_HMG-box | 556..627 | CDD:238684 | 41/70 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |