Sequence 1: | NP_001261829.1 | Gene: | Sox21b / 39569 | FlyBaseID: | FBgn0042630 | Length: | 587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_536328.1 | Gene: | Sox9 / 140586 | RGDID: | 620474 | Length: | 507 | Species: | Rattus norvegicus |
Alignment Length: | 381 | Identity: | 111/381 - (29%) |
---|---|---|---|
Similarity: | 157/381 - (41%) | Gaps: | 104/381 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 243 QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAM 307
Fly 308 HMKEHPDYKYRPRRKP------------------------KALRRDGYPYPMPYPSVPVEALRAG 348
Fly 349 ITPGYFAPGPTAAAYHLGSHLGQTSTPTTTQATLSGQMDKFALER-------------------- 393
Fly 394 -----SSYLSN--SSQASAYSAYLDPS------------VLTKAYFDSKMYQDRAANYAFDISKI 439
Fly 440 YG----------AQQHAAAHHQQQQQQQQQQQQQQQQ----LLLSGGGGSGGGGSASSHNNNSSS 490
Fly 491 GLDDRDATPQLEAVE--SKPHLHSPSDVGLDYAQY----AQQYGGQLAAAAGGAVG 540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox21b | NP_001261829.1 | SOX-TCF_HMG-box | 247..318 | CDD:238684 | 44/70 (63%) |
Sox9 | NP_536328.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..67 | ||
Sox_N | 22..94 | CDD:403592 | |||
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 | 63..103 | 1/2 (50%) | |||
PQA. /evidence=ECO:0000250|UniProtKB:P48436 | 63..103 | 1/2 (50%) | |||
SOX-TCF_HMG-box | 104..174 | CDD:238684 | 43/69 (62%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 160..271 | 33/130 (25%) | |||
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 | 224..307 | 18/89 (20%) | |||
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 | 275..284 | 1/8 (13%) | |||
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 | 290..298 | 0/7 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 335..429 | 23/94 (24%) | |||
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 | 392..507 | 15/69 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 477..507 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |