DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox21b and SOX30

DIOPT Version :10

Sequence 1:NP_001261829.1 Gene:Sox21b / 39569 FlyBaseID:FBgn0042630 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_848511.1 Gene:SOX30 / 11063 HGNCID:30635 Length:753 Species:Homo sapiens


Alignment Length:422 Identity:104/422 - (24%)
Similarity:158/422 - (37%) Gaps:105/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LSHQTHSNGSSQLGGGSASGAGSVAGGAANSH----------HSAPASSSVMAAAAAAHLHHNSQ 206
            |..:..|||   |..|||....:...||...|          |:.|..:.:....|.........
Human   226 LGAEPASNG---LVHGSAEVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLT 287

  Fly   207 ASPISNLHQNMGSLMN----------------SGSSASDVFFSLMIQNTTKRQNEEHIKRPMNAF 255
            ..|::.:...|.||:.                |.:...|..||        :....|:|||||||
Human   288 KVPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFS--------KDRNGHVKRPMNAF 344

  Fly   256 MVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYKYRPR 320
            |||:|:.|..:|:.||..:|:|||.:||.||..|:||:|:|:.|||::::..|.:|.|.:.|:||
Human   345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPR 409

  Fly   321 -----RKPKALRR--DG-------------YPYPMPYPSVPVEALRAGITPGYFAPGPTAAAYHL 365
                 |.|.::..  .|             |||..|..||.:.:|:..||   ...|.|:.|..|
Human   410 PGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPIT---HPVGETSPAIQL 471

  Fly   366 GSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNSSQASAYSAYLDPSV-----LTKAYFDSKMY 425
            .:...|:.:|.|                  ....|..::|..|..|||:     |....|.....
Human   472 PTPAVQSPSPVT------------------LFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQ 518

  Fly   426 QDRAANYAFDISKIYGAQQHAAAHHQQQQQQQQQQQQQQQQLLLSGGGGSGGGGSASS-----HN 485
            .|.             .|.|:.|.|..:|......:...:   :|....:.....|:|     ..
Human   519 TDT-------------HQLHSEATHTVKQPTPVSLESANR---ISSSASTAHARFATSTIQPPRE 567

  Fly   486 NNSSSGLDDRDATPQLEAVESKPHLHSPSDVG 517
            .:|.|........||...: ..||::.|..:|
Human   568 YSSVSPCPRSAPIPQASPI-PHPHVYQPPPLG 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox21bNP_001261829.1 HMG-box_SoxB 246..325 CDD:438790 40/83 (48%)
SOX30NP_848511.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..161
HMG-box_SoxH_SOX30 336..410 CDD:438842 37/73 (51%)
Herpes_BLLF1 <405..609 CDD:282904 47/232 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 514..575 11/76 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..753
Blue background indicates that the domain is not in the aligned region.

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